PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759767.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 273aa MW: 31305 Da PI: 5.4476

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++k++G g+W++ ++ g+ R++k+c++rw +yl XP_022759767.1 14 KGPWTAEEDQILIDYIKLYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.4	2.5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_022759767.1 67 RGNFTREEEDTIINLHEMLGNR-WAAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MVRAPCCEKM GLKKGPWTAE EDQILIDYIK LYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TREEEDTIIN LHEMLGNRWA AIAARLPGRT DNEIKNVWHT HLKKRLKQNH 120 GSNDNKRQAN FDSSKNIKKE QEPVNFLGPV TADSPGYRPV SPPESSSEIS TVTTSENNSN 180 ICMMKIETRE DFSEIDENFW SEVLSADNSS MASDFQVVGS DPQTYRQYFP SFPLATLEPV 240 NDYGSNLYDN DTNMDFWYNL FTRAGDLPEV PEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-80	MYB family protein