PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759889.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 441aa    MW: 48296.9 Da    PI: 5.2998
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.97.8e-117794383374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                      lLl+cAe+v+ ++le a+ lL ++sel+sp g++ +R+ ayf+ AL+ar+++s+ ++y+ l +++ + ++s++ ++al+ ++ +sP++kfsh+t
  XP_022759889.1  79 GLLLQCAECVAMDKLEDATDLLPEISELSSPFGSSPERVGAYFAHALQARVVSSCLRTYSPLDAKSLTLTQSQKIFNALQSYNSISPLVKFSHFT 173
                     58******************************************************************9************************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     aNqaI +a++ge+rvH+iD+di+qGlQWp L++ LasR+++  s+RiTg+gs    s+e le tg+rLa+fA++lg+pfef++l  k  +  +l+
  XP_022759889.1 174 ANQAIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGS----SSELLELTGKRLADFATSLGLPFEFHPLEGKIGNVTDLS 264
                     ****************************************************....99*************************9777777779** PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                     +L v+p Eal+V++++  h l+d ++s       +L+l+  l+Pk++++veq+++h ++sFl rf+eal+yysalfd+l  +l+ +s er++vE+
  XP_022759889.1 265 QLGVQPSEALVVHWMH--HCLYDITGSDLG----TLRLLTMLRPKLITIVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGVDSLERHMVEQ 352
                     **************99..777777777777....**********************.789*********************************** PP

            GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +l+g ei+n+va  g +r+ + + +e+W e l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  XP_022759889.1 353 QLFGSEIRNIVAVGGPKRTGEVK-VERWGEELKRVGFQPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 438
                     *****************998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MLQSLVPQSP IKSNRSSNPM SSMKSKRDDR DISATSVDDS SADDPSTKRP NFSSGDKTAI  60
DEQEEAVIEG ESTVLRLLGL LLQCAECVAM DKLEDATDLL PEISELSSPF GSSPERVGAY  120
FAHALQARVV SSCLRTYSPL DAKSLTLTQS QKIFNALQSY NSISPLVKFS HFTANQAIFQ  180
ALDGEDRVHV IDLDIMQGLQ WPGLFHILAS RSKKIRSMRI TGFGSSSELL ELTGKRLADF  240
ATSLGLPFEF HPLEGKIGNV TDLSQLGVQP SEALVVHWMH HCLYDITGSD LGTLRLLTML  300
RPKLITIVEQ DLSHGGSFLG RFVEALHYYS ALFDALGDGL GVDSLERHMV EQQLFGSEIR  360
NIVAVGGPKR TGEVKVERWG EELKRVGFQP VSLGGNPAAQ ASLLLGMFPW KGYTLVEENG  420
CLKLGWKDLS LLTASAWQPS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.10.0GRAS family protein