PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759923.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 301aa    MW: 34070.5 Da    PI: 5.0839
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.21e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT++Ed +l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_022759923.1 14 RGPWTADEDTKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding53.55.5e-1771111547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++ E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
   XP_022759923.1  71 SEHEEQMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                      799***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGRQPCCVKV GLKRGPWTAD EDTKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKGGLL SEHEEQMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG  120
IDPLTHQPLS TTEQQQQQQE QVSKAAVKTQ VLCKIKEPET SLQSTITEAK EEEKSMTTSP  180
LFDPMEVMNN IDGFCTDEVP LIEPHEILVP CSAPSNSSSS FSSCDSSKFL EELQFPDFGW  240
PSDYNNSSCN NNNLSLWDDD FSSWDWLIND DDGDKKLALA SLSSPLIQCP RMGLDQDYEI  300
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.16e-93MYB family protein