PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759929.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 258aa MW: 29797.4 Da PI: 9.3357

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7.1e-17	46	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++ +G g+W++ ++ g++R++k+c++rw +yl XP_022759929.1 46 KGAWSKQEDQKLIDYIRIHGEGCWRSLPKAAGLHRCGKSCRLRWINYL 93 79********************************************97 PP
2	Myb_DNA-binding	51.1	3.2e-16	99	143	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ XP_022759929.1 99 RGNFAQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 143 89999***************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MPPLCFLVTF YLCFLQFLIS FLGSFWIERE RRRMRKPCCD KHGTNKGAWS KQEDQKLIDY 60 IRIHGEGCWR SLPKAAGLHR CGKSCRLRWI NYLRPDIKRG NFAQDEEDLI IKLHALLGNR 120 WSLIAGRLPG RTDNEVKNYW NSHIKRKLIE MGIDPNNHKL NQYPIRPHPQ PVIPPNPTSL 180 NVTCKLRGSS VDNDRISDAA SCLEDEKFGV SNLDLDLTIA FPSAPIKVII EEKQQTRASI 240 VTRDQEENHT APTLPLFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	37	ERRRMRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	1e-75	MYB family protein