PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760207.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 641aa MW: 71814 Da PI: 5.1266

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.5e-13	440	487	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r+h ErrRR+++N++f L+ llP++ K +K++iL ++eY+++L XP_022760207.1 440 CRSHVLSERRRREKLNERFIILKALLPSN-----SKADKVSILDDTIEYLQDL 487 68999*********************8.....7**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MATGVQIQER VPENLKKQLA LTVQDIQWSY AIFWTISARQ PGVLQWGDGY YNGDIKTRKT 60 VQTVELNADQ LGLQRSEQLR ELYESLSAGD SSPQARRPSV SLSPEDLTDT EWYYLVCMSF 120 VFNIGQGLPG RTLSSGQPIW LCNAHYAESK VFSRSLLAKS ASIQTVVGFP FSRGVIELGV 180 TDLVLEDLSL IQRVKTSFLD TPQPFASNKS IPVDGITEND KDLTGPAFDP QILDTKVSPL 240 LGCEQIEMAS PNDSSDGFEP NQPAEGSFMV EGINGGASQI QSWQLMDEEF SNCVHHSLNS 300 SDCISQTFVD HANVVPLCQG EKDNDNGLED VQECHQTKLT SLDFQSDDLH YQMVLSALLK 360 SSHQLILGLH FQNSNHESSF VSWKKNGFLK SQKARGKTPQ KLLKKILFEV PLMHDKGLLE 420 SPEDNGVRDA AWRPEADEIC RSHVLSERRR REKLNERFII LKALLPSNSK ADKVSILDDT 480 IEYLQDLAKR VEELESSREL TELEERMKRK PQDHVERTSD NYGNNKITNG KKSSINKRKA 540 CDIDEAELEI DYVASKDGLT DNLTVSMNKK DFLIEFRCPW REGILLEIMD ALSTLNLDCH 600 SVQSSTTEGI LSLTIKSKYK GSTVASAGTI KQALQRVARK C

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MATGVQIQER VPENLKKQLA LTVQDIQWSY AIFWTISARQ PGVLQWGDGY YNGDIKTRKT  60
VQTVELNADQ LGLQRSEQLR ELYESLSAGD SSPQARRPSV SLSPEDLTDT EWYYLVCMSF  120
VFNIGQGLPG RTLSSGQPIW LCNAHYAESK VFSRSLLAKS ASIQTVVGFP FSRGVIELGV  180
TDLVLEDLSL IQRVKTSFLD TPQPFASNKS IPVDGITEND KDLTGPAFDP QILDTKVSPL  240
LGCEQIEMAS PNDSSDGFEP NQPAEGSFMV EGINGGASQI QSWQLMDEEF SNCVHHSLNS  300
SDCISQTFVD HANVVPLCQG EKDNDNGLED VQECHQTKLT SLDFQSDDLH YQMVLSALLK  360
SSHQLILGLH FQNSNHESSF VSWKKNGFLK SQKARGKTPQ KLLKKILFEV PLMHDKGLLE  420
SPEDNGVRDA AWRPEADEIC RSHVLSERRR REKLNERFII LKALLPSNSK ADKVSILDDT  480
IEYLQDLAKR VEELESSREL TELEERMKRK PQDHVERTSD NYGNNKITNG KKSSINKRKA  540
CDIDEAELEI DYVASKDGLT DNLTVSMNKK DFLIEFRCPW REGILLEIMD ALSTLNLDCH  600
SVQSSTTEGI LSLTIKSKYK GSTVASAGTI KQALQRVARK C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	447	452	ERRRRE
2	448	453	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein