PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760464.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 803aa MW: 90722.1 Da PI: 6.7326

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	116.8	1.2e-36	138	213	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++C+ad+se+k yhrrh+vC ++++++vl++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_022760464.1 138 RCQVPSCKADISELKGYHRRHRVCLRCANSTTVLIDGESKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRK 213 6************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MEQDPSPRTQ TPRGTHRSKD PEMDVHFPVT EADPSSSVWD WDDLLDFTVD EHFSISFDDE 60 NSSHSPLETT GTDPDPVPGP GRVRKRDPRM ICSNFLAGQV PCACPEIDAQ IEKLEEEEAG 120 VPGKKRARTG RCGPGTCRCQ VPSCKADISE LKGYHRRHRV CLRCANSTTV LIDGESKRYC 180 QQCGKFHLLS DFDEGKRSCR RKLERHNNRR RRKPVGSKTA VNKEGLQSED IARDGEAGKD 240 DLSFSGQIAE EEPAFESEDV HVSTYCSAPM LQSVNNDSVV TLNETETDGA KDDSKVSIST 300 SYCDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLANMPVELE GYIRPGCTIL 360 TMFISMPKNM WMKLSENPMT HMHNFVFTPG RMLYGRGFMT IYLNNMIFRT RKDGTSMVKV 420 DVEVQAPRLH YVHPACFEAG KPMEFVACGT NLLQPKFRFL VSFAGRYLPN DYCVASTHVQ 480 SKEDSPSCDH RLYKIYVPQT EPDLFGPAFI EVENQSGLSN FIPVLIGDKE VCSEMKSLQK 540 RFDASLFQGG SKISATGSLL ELCEASTSRQ SAYSDFVLDI AWLLREPKLE NLQEIMTSSQ 600 IQRFNCLLSF LIQNESTVIL KKVLQNLKTV VQKAGFTGTN DSGIRLLKKY MDYARDILSN 660 KLQKGESPVL LSEYIERERN WYSQRSFKND ELAVVPNVSQ DSEERTSGKL PTLMASTTLA 720 RSETVWLLNK EIIMNVNLSK DFRRESCSPI FATTTLGYRP TVFVIATAAI CLGMCAVFFH 780 PNTVGEFAVT IRRCLLERVL DVD

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MEQDPSPRTQ TPRGTHRSKD PEMDVHFPVT EADPSSSVWD WDDLLDFTVD EHFSISFDDE  60
NSSHSPLETT GTDPDPVPGP GRVRKRDPRM ICSNFLAGQV PCACPEIDAQ IEKLEEEEAG  120
VPGKKRARTG RCGPGTCRCQ VPSCKADISE LKGYHRRHRV CLRCANSTTV LIDGESKRYC  180
QQCGKFHLLS DFDEGKRSCR RKLERHNNRR RRKPVGSKTA VNKEGLQSED IARDGEAGKD  240
DLSFSGQIAE EEPAFESEDV HVSTYCSAPM LQSVNNDSVV TLNETETDGA KDDSKVSIST  300
SYCDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLANMPVELE GYIRPGCTIL  360
TMFISMPKNM WMKLSENPMT HMHNFVFTPG RMLYGRGFMT IYLNNMIFRT RKDGTSMVKV  420
DVEVQAPRLH YVHPACFEAG KPMEFVACGT NLLQPKFRFL VSFAGRYLPN DYCVASTHVQ  480
SKEDSPSCDH RLYKIYVPQT EPDLFGPAFI EVENQSGLSN FIPVLIGDKE VCSEMKSLQK  540
RFDASLFQGG SKISATGSLL ELCEASTSRQ SAYSDFVLDI AWLLREPKLE NLQEIMTSSQ  600
IQRFNCLLSF LIQNESTVIL KKVLQNLKTV VQKAGFTGTN DSGIRLLKKY MDYARDILSN  660
KLQKGESPVL LSEYIERERN WYSQRSFKND ELAVVPNVSQ DSEERTSGKL PTLMASTTLA  720
RSETVWLLNK EIIMNVNLSK DFRRESCSPI FATTTLGYRP TVFVIATAAI CLGMCAVFFH  780
PNTVGEFAVT IRRCLLERVL DVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	212	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein