PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760466.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 766aa MW: 86581.4 Da PI: 6.8296

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	116.9	1.1e-36	138	213	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++C+ad+se+k yhrrh+vC ++++++vl++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_022760466.1 138 RCQVPSCKADISELKGYHRRHRVCLRCANSTTVLIDGESKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRK 213 6************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MEQDPSPRTQ TPRGTHRSKD PEMDVHFPVT EADPSSSVWD WDDLLDFTVD EHFSISFDDE 60 NSSHSPLETT GTDPDPVPGP GRVRKRDPRM ICSNFLAGQV PCACPEIDAQ IEKLEEEEAG 120 VPGKKRARTG RCGPGTCRCQ VPSCKADISE LKGYHRRHRV CLRCANSTTV LIDGESKRYC 180 QQCGKFHLLS DFDEGKRSCR RKLERHNNRR RRKPVGSKTA VNKEGLQSED IARDGEAGKD 240 DLSFSGQIAE EEPAFESEDV HVSTYCSAPM LQSVNNDSVV TLNETETDGA KDDSKVSIST 300 SYCDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLANMPVELE GYIRPGCTIL 360 TMFISMPKNM WMKLSENPMT HMHNFVFTPG RMLYGRGFMT IYLNNMIFRT RKDGTSMVKV 420 DVEVQAPRLH YVHPACFEAG KPMEFVACGT NLLQPKFRFL VSFAGRYLPN DYCVASTHVQ 480 SKEDSPSCDH RLYKIYVPQT EPDLFGPAFI EGGSKISATG SLLELCEAST SRQSAYSDFV 540 LDIAWLLREP KLENLQEIMT SSQIQRFNCL LSFLIQNEST VILKKVLQNL KTVVQKAGFT 600 GTNDSGIRLL KKYMDYARDI LSNKLQKGES PVLLSEYIER ERNWYSQRSF KNDELAVVPN 660 VSQDSEERTS GKLPTLMAST TLARSETVWL LNKEIIMNVN LSKDFRRESC SPIFATTTLG 720 YRPTVFVIAT AAICLGMCAV FFHPNTVGEF AVTIRRCLLE RVLDVD

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MEQDPSPRTQ TPRGTHRSKD PEMDVHFPVT EADPSSSVWD WDDLLDFTVD EHFSISFDDE  60
NSSHSPLETT GTDPDPVPGP GRVRKRDPRM ICSNFLAGQV PCACPEIDAQ IEKLEEEEAG  120
VPGKKRARTG RCGPGTCRCQ VPSCKADISE LKGYHRRHRV CLRCANSTTV LIDGESKRYC  180
QQCGKFHLLS DFDEGKRSCR RKLERHNNRR RRKPVGSKTA VNKEGLQSED IARDGEAGKD  240
DLSFSGQIAE EEPAFESEDV HVSTYCSAPM LQSVNNDSVV TLNETETDGA KDDSKVSIST  300
SYCDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLANMPVELE GYIRPGCTIL  360
TMFISMPKNM WMKLSENPMT HMHNFVFTPG RMLYGRGFMT IYLNNMIFRT RKDGTSMVKV  420
DVEVQAPRLH YVHPACFEAG KPMEFVACGT NLLQPKFRFL VSFAGRYLPN DYCVASTHVQ  480
SKEDSPSCDH RLYKIYVPQT EPDLFGPAFI EGGSKISATG SLLELCEAST SRQSAYSDFV  540
LDIAWLLREP KLENLQEIMT SSQIQRFNCL LSFLIQNEST VILKKVLQNL KTVVQKAGFT  600
GTNDSGIRLL KKYMDYARDI LSNKLQKGES PVLLSEYIER ERNWYSQRSF KNDELAVVPN  660
VSQDSEERTS GKLPTLMAST TLARSETVWL LNKEIIMNVN LSKDFRRESC SPIFATTTLG  720
YRPTVFVIAT AAICLGMCAV FFHPNTVGEF AVTIRRCLLE RVLDVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	212	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein