PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760640.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 731aa MW: 83900.1 Da PI: 6.8198

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.7e-20	34	127	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++++ +++ k +r+r + r+gC+a +++ k+ +w+vt +++ HnHel XP_022760640.1 34 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQTKLSEDGKMQRNRISLRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHELL 127 6*************9998874556679***************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MVEMAEDSIL SQQTSVNLVP FIGQRFVSQD AAYEFYCSFA KQCGFSIRRH RTRGKDGVGR 60 GVTRRDFTCH RGGYPQTKLS EDGKMQRNRI SLRCGCQAYM RIVKRADFDV PEWRVTGFSN 120 IHNHELLKEN ELHLLPAYCT ITPDDKARIC MFAKAGMSVR QMLRLMELEK GVKLGCLPFT 180 EIDVRNLLQS FRNVNRDYDP IDLIAMCKKL KDENPNFQYD FKLDGHNRLE HIAWTYASSV 240 RLYETFGDAV VFDTTHRMDC YDMLLGIWVG VDNHGMTSFF GCLLLRDENM QSFSWGLKTF 300 LGFMKGKAPQ TLLTDQNMWL KGAIALEMPE TKHAFCIWHI ISKFSDWFSV LLGSRYDDWK 360 SDFYRIYSLE LLEDFEEEWR EMVDKYILHD NKHIISLYAL RTFWALPFLR PYFFAGLANS 420 CQSEIINAFI QKILSAQSQL DQFVEQVAEI VEFNDRAGSK QKMQRKLQKI CLKTGSPIES 480 HAATVLTPYA FGKLQEELLL APQYASFLVD EGCFQVKHHT QMEGGCKVIW IPCEEHISCS 540 CHHFEFSGIL CRHVLRVLSS NNCFHIPDQY LPSRWRINSS SSPKPLRNAM REHSEKIQLL 600 ESMASTLVAE SIETEERLDV ACEQTAMVLS RIKDLPRPTH SANDIVYNCP SDLILPEVED 660 ADGIVQSLTI GTSHEPLSSG KLKERRPRDG IDITRKRRHF SGSCCGQFGH DSSDCPMMGG 720 DNLNGDALGY L

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MVEMAEDSIL SQQTSVNLVP FIGQRFVSQD AAYEFYCSFA KQCGFSIRRH RTRGKDGVGR  60
GVTRRDFTCH RGGYPQTKLS EDGKMQRNRI SLRCGCQAYM RIVKRADFDV PEWRVTGFSN  120
IHNHELLKEN ELHLLPAYCT ITPDDKARIC MFAKAGMSVR QMLRLMELEK GVKLGCLPFT  180
EIDVRNLLQS FRNVNRDYDP IDLIAMCKKL KDENPNFQYD FKLDGHNRLE HIAWTYASSV  240
RLYETFGDAV VFDTTHRMDC YDMLLGIWVG VDNHGMTSFF GCLLLRDENM QSFSWGLKTF  300
LGFMKGKAPQ TLLTDQNMWL KGAIALEMPE TKHAFCIWHI ISKFSDWFSV LLGSRYDDWK  360
SDFYRIYSLE LLEDFEEEWR EMVDKYILHD NKHIISLYAL RTFWALPFLR PYFFAGLANS  420
CQSEIINAFI QKILSAQSQL DQFVEQVAEI VEFNDRAGSK QKMQRKLQKI CLKTGSPIES  480
HAATVLTPYA FGKLQEELLL APQYASFLVD EGCFQVKHHT QMEGGCKVIW IPCEEHISCS  540
CHHFEFSGIL CRHVLRVLSS NNCFHIPDQY LPSRWRINSS SSPKPLRNAM REHSEKIQLL  600
ESMASTLVAE SIETEERLDV ACEQTAMVLS RIKDLPRPTH SANDIVYNCP SDLILPEVED  660
ADGIVQSLTI GTSHEPLSSG KLKERRPRDG IDITRKRRHF SGSCCGQFGH DSSDCPMMGG  720
DNLNGDALGY L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein