PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760651.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CAMTA

Protein Properties

Length: 872aa MW: 97829.5 Da PI: 8.1108

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	134.5	3.7e-42	20	104	34	118
CG-1 34 pksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 + g+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++nptf rrcywlL+++le+ivlvhy+e++ XP_022760651.1 20 LEGGAIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFVRRCYWLLDKTLEHIVLVHYRETQ 104 6789******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MDGGGSGRLV GTEIHGFHTL EGGAIVLFDR KMLRNFRKDG HNWKKKKDGK TVKEAHEHLK 60 VGNEERIHVY YAHGQDNPTF VRRCYWLLDK TLEHIVLVHY RETQELQGSP ATPGNSNSSS 120 ITDQSTSLLP TEEFDSGTGN AFYEEPSDSV KARNHEMTLH EINTLEWDEL LVTNDTNGST 180 VSKRDKNSCF DQQNQITVNG FPNYGAPISA YNLSTEFSLL GNLVEPVAQS GNAYLNTPEG 240 VCHLVSGGQG NSNVQRKDSS PIGPGESLDF LLNDGLQSQD SFGRWLDYIV TESPGSVGDP 300 LLESSISSGQ DSTSPEQIFS ITEVSPAWAY CTEKTKILVT GVFHRAYQHL AKSNLFCVCG 360 DVSNPAEIIQ VGVYRCFLSQ HSPGLVNLYM SRDGHKPISQ VLGFEYRAPL VHDLIVPPED 420 ESRWEEFQLQ IRLAYLLFST SKSLNILSGK VSANSLKEAK TFAQKTTNIS NSWTYLIKSI 480 EQNRASLTQA KDSLFEIALK NRLKDWLLER IIEGCKTTEY DAQGQGVLHL CAILGYTWAI 540 YLFSWSSLSL DFRDKHGWTA LHWAAYYGRE KMVAVLLSAG AKPNLVTDPT TQNPGGCTAA 600 DLASLKGYDG LAAYLSEEAL VAHFNDMAVA GNTSGFLQTS KTEATSLINL NEDELYLKQT 660 LAAYRTAADA AARIQTAFRE HSLKVRTKAV ESSNTEDEAR SIVAALKIQH AFRNYETKKK 720 MAAAAHIQYR FRTWKMRKDF LNMRRQAIKI QAAFRGLLVR KQYRKILWSV GVVEKAILRW 780 RLKRKGLRGL KVKIVEAVPA QSQESDAEED FYRTSRKQAE ERVEKAVVRV QTMFRSKKAQ 840 QEYRRMKLAR DVAALEYESL LDPPSNMDTG RY

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MDGGGSGRLV GTEIHGFHTL EGGAIVLFDR KMLRNFRKDG HNWKKKKDGK TVKEAHEHLK  60
VGNEERIHVY YAHGQDNPTF VRRCYWLLDK TLEHIVLVHY RETQELQGSP ATPGNSNSSS  120
ITDQSTSLLP TEEFDSGTGN AFYEEPSDSV KARNHEMTLH EINTLEWDEL LVTNDTNGST  180
VSKRDKNSCF DQQNQITVNG FPNYGAPISA YNLSTEFSLL GNLVEPVAQS GNAYLNTPEG  240
VCHLVSGGQG NSNVQRKDSS PIGPGESLDF LLNDGLQSQD SFGRWLDYIV TESPGSVGDP  300
LLESSISSGQ DSTSPEQIFS ITEVSPAWAY CTEKTKILVT GVFHRAYQHL AKSNLFCVCG  360
DVSNPAEIIQ VGVYRCFLSQ HSPGLVNLYM SRDGHKPISQ VLGFEYRAPL VHDLIVPPED  420
ESRWEEFQLQ IRLAYLLFST SKSLNILSGK VSANSLKEAK TFAQKTTNIS NSWTYLIKSI  480
EQNRASLTQA KDSLFEIALK NRLKDWLLER IIEGCKTTEY DAQGQGVLHL CAILGYTWAI  540
YLFSWSSLSL DFRDKHGWTA LHWAAYYGRE KMVAVLLSAG AKPNLVTDPT TQNPGGCTAA  600
DLASLKGYDG LAAYLSEEAL VAHFNDMAVA GNTSGFLQTS KTEATSLINL NEDELYLKQT  660
LAAYRTAADA AARIQTAFRE HSLKVRTKAV ESSNTEDEAR SIVAALKIQH AFRNYETKKK  720
MAAAAHIQYR FRTWKMRKDF LNMRRQAIKI QAAFRGLLVR KQYRKILWSV GVVEKAILRW  780
RLKRKGLRGL KVKIVEAVPA QSQESDAEED FYRTSRKQAE ERVEKAVVRV QTMFRSKKAQ  840
QEYRRMKLAR DVAALEYESL LDPPSNMDTG RY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein