PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022760822.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 1222aa    MW: 139454 Da    PI: 6.0485
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022760822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS133.13.1e-4173053331
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++Ll+cA+a+++g+l+la++ L+r+ +la+++  +   +++++f+eAL +r ++        l+p+                  +  P   f+h 
  XP_022760822.1   7 QALLACAQAIQDGNLKLADSHLERILNLAAKESdEQQSKVVKFFAEALVRRAYG--------LHPTIPY----------N---LQFLPS-CFTHP 79 
                     89***********************9996666638899***************9........3333222..........1...122343.39999 PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe..fnvlvakrledl 189
                     ++N+ I   v + +r+H iDf+i +    + L+ +L +  ++p s+R+ ++ +p  +++ +++e ++   ++A+ +gv++e   +v++a++l ++
  XP_022760822.1  80 ICNN-IDTVVTRMKRLHLIDFNIPHLYEGAYLFGELGNLFADPLSVRVSVILPPFLKKSVNIQEEKQYVLSYAKVCGVELEddLKVVYANSLGEV 173
                     9996.999*********************************************9999***********************85578899******* PP

            GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     + ++L++++  +Ea++V   l+l+ ll++ +++e    e Lk +++++P++v ++eq+a+ n+++F +r+ ++++yys  +   +++     +  
  XP_022760822.1 174 DESMLDFRRseDEAVVVLYCLKLQMLLADAGAMER---ESLK-LRQINPEIVMIIEQDANNNDSNFIKRLEDSFQYYSDAL---HVE----GDSC 257
                     *******9999**********************99...8887.6**********************************655...444....3557 PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplse 331
                     +k+E+   +r+i+n+v ceg++r+ rhetl++Wr+rl   GF pvpl+ 
  XP_022760822.1 258 QKMEND-YRRQIRNIVGCEGKDRIVRHETLAQWRSRLLWYGFLPVPLEG 305
                     899999.89*************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1222 aa     Download sequence    
MGSSALQALL ACAQAIQDGN LKLADSHLER ILNLAAKESD EQQSKVVKFF AEALVRRAYG  60
LHPTIPYNLQ FLPSCFTHPI CNNIDTVVTR MKRLHLIDFN IPHLYEGAYL FGELGNLFAD  120
PLSVRVSVIL PPFLKKSVNI QEEKQYVLSY AKVCGVELED DLKVVYANSL GEVDESMLDF  180
RRSEDEAVVV LYCLKLQMLL ADAGAMERES LKLRQINPEI VMIIEQDANN NDSNFIKRLE  240
DSFQYYSDAL HVEGDSCQKM ENDYRRQIRN IVGCEGKDRI VRHETLAQWR SRLLWYGFLP  300
VPLEGKPWLL SCVFHEENGC WVSNKDYLPK FFISAWKLAH WEDHFNLSSY NIGQGFNTFS  360
TLEDMVQPLQ PLHEVSSLNR LAAFVEIYDM LEDVCLKYKL SLALTWACGT NVKQNLDGTI  420
SDPYKKDILY IESTYSYANN LNSRWFMETY AKQNHLLEGQ AIVGKALQSN EPFLFESSIV  480
KPEKRDYQLP FVAREFGPHA ALAICLQNHY NDVYVVEFFL PLSKGKLEKP ESVALHIFND  540
LKNKKKMFVT LRVQGTEVGF QEEATSNIPQ VTMSMRSPPP ASSINDFLNS NITRPLNTFE  600
PRDGHVELGG QGFNEQGAMV SCSDQVGMAT IGFSSVSIHA SSLGGICPFN ASMPVGYDAV  660
LETQGPWNRE KNCISQIISN GDNKILKVNK VSAIPRTKQR RSEVWKDFIK YEENGKQWAK  720
CNHCKKEFTG SSKSGTTHLK NHLERCPVKK SEYQERQLKF PAETGDSATQ DINERNSTFD  780
QERSRLDLVK MIIKHQFPLD MAELEFFKNF AKNLQPMFEF QSQAIILSDI HHVHEEEKEK  840
LQQYLDQIAC NFSLTIRMWK DNPRKIAYCC LIAHFIDDGW ELKAKIIAFK ILEHSYDTGA  900
LIGIIRSSIS EWNMSKKVCS ITVDNSSLND DLVQQIKEAC LSDQGSLLSS HCFISCTLIQ  960
DGLHEIDDIV LKMRKSIEYI SETAHGKLKF QEAVNQVKLQ GGKSRDDLPL RLDSDFGILD  1020
SALELREIFC QMEQIDGSFR VNPSMEEWDK AIALHSCLKG FYDILSSFEG IQSLTANLYF  1080
PKLCNIYKKF LQLEKSSYPF VSLMKRKFDN YWSLCNLVFT VTVVLDPRLK FKFVEFSYRE  1140
IYGPDSKMQL NKFHKVLMDV YHEYANEPRN LTTSASDFGD FGSSTGQSTP IANDCILDSF  1200
GKFASASNFN ELASWKSELD AI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.16e-39GRAS family protein