PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760923.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 400aa MW: 44655 Da PI: 5.0238

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l ++++ G g+W++ +++ g+ R++k+c++rw +yl XP_022760923.1 14 RGRWTAEEDEILTNYIQANGEGSWRSLPKHAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	51.4	2.5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E+e +v+++ +G++ W++Ia+ ++ gRt++++k++w+++l XP_022760923.1 67 RGNITPQEEETIVKLHSAFGNR-WSLIAAQLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGRSPCCEKV GLKRGRWTAE EDEILTNYIQ ANGEGSWRSL PKHAGLLRCG KSCRLRWINY 60 LRSGLKRGNI TPQEEETIVK LHSAFGNRWS LIAAQLPGRT DNEIKNYWNS HLSRKIYSFT 120 KTIKENKPSD INVVTTAGEG MPRRGRTSRS AMKRHKLALM SLGIPKTANP NEAFDDHAAP 180 ESNPAGGETQ NRKELTYLQL DNEGRRNLGM HGSCIHSNAM PASNYDDQRQ STGIALSSGE 240 ESSRIAVEIY GCSEGETDQV LGPYEWLDNE INRLSSILQS DQGVDPSGNR AGLTTTNGEN 300 GVRVIITDQD RVNGVQNGAE NDDQERESYG IWNSNANIPD EKWQMCNSSS PGNSGFDDQE 360 WLHWEYSAGD DQWELWDDSD KVLCWLRDSS NADEAGNTPN

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGRSPCCEKV GLKRGRWTAE EDEILTNYIQ ANGEGSWRSL PKHAGLLRCG KSCRLRWINY  60
LRSGLKRGNI TPQEEETIVK LHSAFGNRWS LIAAQLPGRT DNEIKNYWNS HLSRKIYSFT  120
KTIKENKPSD INVVTTAGEG MPRRGRTSRS AMKRHKLALM SLGIPKTANP NEAFDDHAAP  180
ESNPAGGETQ NRKELTYLQL DNEGRRNLGM HGSCIHSNAM PASNYDDQRQ STGIALSSGE  240
ESSRIAVEIY GCSEGETDQV LGPYEWLDNE INRLSSILQS DQGVDPSGNR AGLTTTNGEN  300
GVRVIITDQD RVNGVQNGAE NDDQERESYG IWNSNANIPD EKWQMCNSSS PGNSGFDDQE  360
WLHWEYSAGD DQWELWDDSD KVLCWLRDSS NADEAGNTPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	6e-77	MYB family protein