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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_022760991.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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| Family | GRAS | ||||||||
| Protein Properties | Length: 470aa MW: 52855.6 Da PI: 6.3272 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 319.7 | 5.9e-98 | 98 | 469 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
+lL ecA+a+s++d +++++lL+ l+elasp+gd q+la+yf++AL + ++s++++yk+l++ ++++++ +++ + f+evsP+ +f+h++
XP_022760991.1 98 RLLRECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVA 192
7899**********************************************************9999985554444444445************** PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
aN aIlea++ge+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+ ++ + ++e+ +r++kfA+ +gvpfefnv+ ++l +l+
XP_022760991.1 193 ANGAILEALDGETKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVVT-ANIVRSVMKEISQRMEKFARLMGVPFEFNVIsGLNHLGELTK 286
****************************************************.667999************************955679****** PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse..sFlerflealeyysalfdsleaklpreseerik 284
e+L v ++Ea+aVn++ +l r+ +e+ r +v+++++sl Pkvv+vve+ead +s+ +F++ f e+l++y+ f++le+++ ++s+e+ +
XP_022760991.1 287 EALGVLEDEAIAVNCIGALRRVA-----VEE-RGAVIQMFQSLGPKVVTVVEEEADFSSTryDFVRCFEECLRFYTLYFEMLEESFIPTSNEKLM 375
**********************8.....444.89*********************99555449******************************** PP
GRAS 285 vErellgreivnvvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSa 372
+Ere +r+iv v+ac +++ er+e+ ++W++rl+ea F+pv +s+++++++k+ll+++ g+ + +++ ++l+Wk++p+v+vSa
XP_022760991.1 376 LERE-CSRSIVRVLACDHDQdsggECERRERGSQWSDRLKEA-FSPVGFSDDVVDDVKALLKRYR-TGWALAqphQDDTGFYLTWKEEPVVWVSA 467
****.89*********99874444579*************98.*********************9.7777775557788999************* PP
GRAS 373 Wr 374
W+
XP_022760991.1 468 WK 469
*8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 470 aa Download sequence |
MKLSSAKVPK ESKGASPSHV GYHNSSLHSE RRSSSHTTLP FQPADHLEQW SSVAVDMHNN 60 NSNNHLHQPQ SSHTSTSRSS DYSAGGEPCA TGNKWASRLL RECARAISDK DSSKIHHLLW 120 MLNELASPYG DCDQKLASYF LQALFCKATE SGQRCYKTLT SVAEKSHSFD SARKLILKFQ 180 EVSPWTTFGH VAANGAILEA LDGETKLHII DISNTLCTQW PTLLEALATR NDETPHLKLT 240 VVVTANIVRS VMKEISQRME KFARLMGVPF EFNVISGLNH LGELTKEALG VLEDEAIAVN 300 CIGALRRVAV EERGAVIQMF QSLGPKVVTV VEEEADFSST RYDFVRCFEE CLRFYTLYFE 360 MLEESFIPTS NEKLMLEREC SRSIVRVLAC DHDQDSGGEC ERRERGSQWS DRLKEAFSPV 420 GFSDDVVDDV KALLKRYRTG WALAQPHQDD TGFYLTWKEE PVVWVSAWKP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G37650.1 | 1e-142 | GRAS family protein | ||||




