PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761049.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 413aa MW: 46653.4 Da PI: 5.0334

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	205	256	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_022761049.1 205 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 256 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MEKEENYSAN FTGLDYSLDH HNHDPHHQDQ LMKQPRIGET SGDNNGMIDY MLNNPHQQQQ 60 QISSSGFCAT PTSFDKLSFA DVMQFADFGP KLALNQTRIP EEETGIDPAG YFLRFPVLND 120 KLEDQSLMLP PSGIENVEGR AAAGLMVEEK GNNIGEDEEA RVSDNASVQL CFLGEDAQNK 180 NPIPEAKNKR KRPRTIKTSE EVESQRMTHI AVERNRRKQM NEHLRVLRSL MPGSYVQRGD 240 QASIIGGAIE FVRELEQLLQ CLESQKRRRL YGEASRQMGD TSSMAIQQQQ QQQPFFPPTS 300 LPNDQIKLVD YDTGLREETA ENKSCLADVE VKLLGFDAMI KILCRRRPGQ LVKTIAALED 360 LQLNILHTNI TTIEQTVLYS FNVKVASESR FSAEDIASSV QQIFSFIHSN CSM

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MEKEENYSAN FTGLDYSLDH HNHDPHHQDQ LMKQPRIGET SGDNNGMIDY MLNNPHQQQQ  60
QISSSGFCAT PTSFDKLSFA DVMQFADFGP KLALNQTRIP EEETGIDPAG YFLRFPVLND  120
KLEDQSLMLP PSGIENVEGR AAAGLMVEEK GNNIGEDEEA RVSDNASVQL CFLGEDAQNK  180
NPIPEAKNKR KRPRTIKTSE EVESQRMTHI AVERNRRKQM NEHLRVLRSL MPGSYVQRGD  240
QASIIGGAIE FVRELEQLLQ CLESQKRRRL YGEASRQMGD TSSMAIQQQQ QQQPFFPPTS  300
LPNDQIKLVD YDTGLREETA ENKSCLADVE VKLLGFDAMI KILCRRRPGQ LVKTIAALED  360
LQLNILHTNI TTIEQTVLYS FNVKVASESR FSAEDIASSV QQIFSFIHSN CSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	217	RMTHIAVERNRR
2	266	270	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-145	bHLH family protein