PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761151.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 292aa MW: 33133 Da PI: 5.2522

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++ G +W++ ++ g+ R++k+c++rw +yl XP_022761151.1 14 KGPWTPEEDQILISYIQKNGHANWRALPKQAGLLRCGKSCRLRWVNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.6	1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e + +++++lG++ W++Ia++++ gRt++++k+ w+++l XP_022761151.1 67 RGNFTSEEEETIFKLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MVRAPCCDKM GMKKGPWTPE EDQILISYIQ KNGHANWRAL PKQAGLLRCG KSCRLRWVNY 60 LKPDIKRGNF TSEEEETIFK LHEMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLKQYQ 120 TKPVTKHNPK SKSKIKCESS DNISTSQLES GHSSSSTTGN IPSRTEIPEQ TPMSPQPSSS 180 EVSSITDVNI ATTDREVNNM DIKAENMEYS WECFPEIDES FWSDAPSSDN SSALPLNFEG 240 VPDEFQSQVP SSSIDHAMEP DHGYVQNLDD AMEFWYDLFI RAGGEQDLIT EF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-88	MYB family protein