PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761182.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 276aa MW: 32351.4 Da PI: 9.3466

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.9e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++ar g++R +k+c++rw +yl XP_022761182.1 21 KGPWTAEEDRLLIEYVRIHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_022761182.1 74 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MSWTVMAGHL GWGIMEEGWR KGPWTAEEDR LLIEYVRIHG EGRWNSVARL AGLKRNGKSC 60 RLRWVNYLRP DLKRGQITPH EESIILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKTKISPDNS DKAKARLLKR QQFQQQQLLQ QQHEQLQQQQ QQQQQQQQQQ QQQQLQLNQF 180 DMKRIMSLLD ETEHRAPYVP QLRQEMAATS YPNTTDQEHG FFYPMINGYV SGTGSDSSNE 240 EILWDGLWNL DDIHGNFGAA CVTSKASLHN LVTPFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	2e-88	MYB family protein