PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022761289.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 311aa    MW: 35083 Da    PI: 7.112
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022761289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.29.2e-192370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_022761289.1 23 RGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 70
                     89********************************************97 PP
2Myb_DNA-binding51.32.6e-1676119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022761289.1  76 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDVKARGCRG NVQSEEDPMD LRRGPWTVEE DFKLINYIAT HGEGRWNSLA RCAGLKRTGK  60
SCRLRWLNYL RPDVRRGNIT LEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR  120
VQKHAKQLKC DVNSKQFKDT MRYLWMPRLV ERIQAAAAAT VNSTTTTTTT SASTTANVGT  180
GQMVLTHGVI SNDFGGVAQV TPSYTPENSS TAASSDSFGT QVSPVSDLTD YYSTIQVNNN  240
PNPDYFQASQ VGYSDHSSSL ISPSGNYYNL GIDFQSMDQQ NNLWLDGVDA SDNFLNAEDV  300
LFLQQQFNFN M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.12e-97MYB family protein