PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761805.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 576aa MW: 62222.9 Da PI: 6.3899

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.7e-09	388	435	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022761805.1 388 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 435 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MEKDNVFMAE GLNRTAAQQP TWNACGFGIE MQTNELNCGT EQVGSCFFNP CWDNSMDQSD 60 LFESALSSIV SSPAASNAGT TLPGSGDNVM IRELIGRLGN ICNSGDISPQ SFIQPNNNTN 120 SANTSCYNTP LNSPPKLNLS MMDSQIRGNL NLPGLGNQLS NHPSLAPFYA DPGFAERAAR 180 FSCFNSSINF GGLNGQLGLT EAELSQRLLP TMDSVKLSRV SSNQSIKVTG SQVNVPESNK 240 NSSQEGNSGS DKKNSRLSGS SWPDNAEFGD SKEESSVSEQ IPGGDSSMKG QNEANARKRK 300 SIPRGKAKEI STSAAADDKV AAGNDESTAK RSKQDGAAGN AKEKTEQNGN AKAANDGNQK 360 QSKESSKPPE PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK 420 AVMLDEIINY VQSLQRQVEF LSMKLATVNP RMDINMEALL SKDMFQSRGS LPHAFYSMNS 480 SAPTFPLGYQ PQQGLHLNNG ISNNKETQFS NNPLNAVLRK TRGLQLPPND GFTDANPQVA 540 SIWEDDLQSI VQMGFGQNQA QSYQGSLAAG QVKIEL

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MEKDNVFMAE GLNRTAAQQP TWNACGFGIE MQTNELNCGT EQVGSCFFNP CWDNSMDQSD  60
LFESALSSIV SSPAASNAGT TLPGSGDNVM IRELIGRLGN ICNSGDISPQ SFIQPNNNTN  120
SANTSCYNTP LNSPPKLNLS MMDSQIRGNL NLPGLGNQLS NHPSLAPFYA DPGFAERAAR  180
FSCFNSSINF GGLNGQLGLT EAELSQRLLP TMDSVKLSRV SSNQSIKVTG SQVNVPESNK  240
NSSQEGNSGS DKKNSRLSGS SWPDNAEFGD SKEESSVSEQ IPGGDSSMKG QNEANARKRK  300
SIPRGKAKEI STSAAADDKV AAGNDESTAK RSKQDGAAGN AKEKTEQNGN AKAANDGNQK  360
QSKESSKPPE PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK  420
AVMLDEIINY VQSLQRQVEF LSMKLATVNP RMDINMEALL SKDMFQSRGS LPHAFYSMNS  480
SAPTFPLGYQ PQQGLHLNNG ISNNKETQFS NNPLNAVLRK TRGLQLPPND GFTDANPQVA  540
SIWEDDLQSI VQMGFGQNQA QSYQGSLAAG QVKIEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	4e-96	bHLH family protein