PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022761983.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 247aa    MW: 27542.8 Da    PI: 8.3586
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022761983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.78e-19169203135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+  Tp+WR gp g+ktLCnaCG++y++ +l
  XP_022761983.1 169 CQHCGAERTPQWRAGPLGPKTLCNACGVRYKSGRL 203
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEAFDMVACL DDKLLDFGSD VGEEDEHEDN SKKLSNHNSS CSCALNHNCS FPEFAEEELE  60
WLSNKDAFPA VETSFVDILG TATKQQSPVS VLDNSNNSSN SSGSTTFTNG NIVRYCCVNV  120
KVPVKARSKR LRKCRDLRNQ ENSWWVQENV KNANVTAKGP GSRTLGRKCQ HCGAERTPQW  180
RAGPLGPKTL CNACGVRYKS GRLVPEYRPA NSPTFSNELH SNSHRKILEM RRQKHLGFSA  240
MKPMDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-54GATA family protein