PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762249.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 452aa MW: 51588.6 Da PI: 5.8151

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	70.2	4e-22	87	181	1	83
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt ++v+ Li++ ++++e+ ++++ +k ++W+ vsk+m erg+++sp+qC++k++nlnk+y+++++ +++ +++++++ +++d XP_022762249.1 87 KWTGKMVKILITILSYIGEDPSTDCvasqrkmssllRKLGKWKCVSKVMVERGYHVSPQQCEDKFNNLNKKYRRLNDLLGRGtSCKVVENPKLLD 181 7********************988899999999999*****************************************95588888887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MEGRPSSTSN MLQGWAYGCL DLQGSMQLQY EQKPCMSELP SGFGLVENER QENMVIEDDV 60 TNYADQGKLE QNEVGKSDDG SPWKRMKWTG KMVKILITIL SYIGEDPSTD CVASQRKMSS 120 LLRKLGKWKC VSKVMVERGY HVSPQQCEDK FNNLNKKYRR LNDLLGRGTS CKVVENPKLL 180 DIIEVSEKGK EDVRKILTSK HLFFEEMCSY HNGNRLFLPH DPDLLQCLLL VLKNEDDSEL 240 HDSGQLVLDG TDKKGGVLAE VDTAEDVGAT SGCPEFLAQW LRLINENEIA GFGNTSKPLD 300 SNQTLNAQGD IAENNGANSR FCAVSAMRLK QTNENEVAGL GNPFNPWDCN QILDAQPVYN 360 LTHRNLSCPE GNEADGSQKQ WMAYRVYQLE KQKLQLKSKV LKLEKQRFKW QRDSWKQDLE 420 LDKMRLENEC LKLGNECMVM QLRRRRMDLQ RD

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MEGRPSSTSN MLQGWAYGCL DLQGSMQLQY EQKPCMSELP SGFGLVENER QENMVIEDDV  60
TNYADQGKLE QNEVGKSDDG SPWKRMKWTG KMVKILITIL SYIGEDPSTD CVASQRKMSS  120
LLRKLGKWKC VSKVMVERGY HVSPQQCEDK FNNLNKKYRR LNDLLGRGTS CKVVENPKLL  180
DIIEVSEKGK EDVRKILTSK HLFFEEMCSY HNGNRLFLPH DPDLLQCLLL VLKNEDDSEL  240
HDSGQLVLDG TDKKGGVLAE VDTAEDVGAT SGCPEFLAQW LRLINENEIA GFGNTSKPLD  300
SNQTLNAQGD IAENNGANSR FCAVSAMRLK QTNENEVAGL GNPFNPWDCN QILDAQPVYN  360
LTHRNLSCPE GNEADGSQKQ WMAYRVYQLE KQKLQLKSKV LKLEKQRFKW QRDSWKQDLE  420
LDKMRLENEC LKLGNECMVM QLRRRRMDLQ RD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	4e-77	Trihelix family protein