PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762309.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 470aa MW: 51989.5 Da PI: 5.5828

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.5e-10	276	323	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022762309.1 276 THSLAERVRREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 323 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MNRALPEMLQ CSDVTALERQ RARLKWQQEQ LQQQQEQQQL PEMLQCSDVT ALGARLKWHQ 60 EQLQQQQEQQ QSYFSELSGV FSSQTTHVQG FQGGLMSFDS VLGDMVMAPQ VKPDPGLETA 120 WPEFGKVDMA GMGFGPCGYG NGSSFDMNYA ISRTSRCQPA VAAAVAAEAV EVKGKESVVS 180 EKMGSAVGRE SFEKRKADKL QNSKVVADDD SKRIKACAEE GESKITGPNT NKSSSNNSNK 240 KKETSTDTSK ENSKVSEAQK PDYIHVRARR GQATDTHSLA ERVRREKISE RMKYLQDLVP 300 GCNKIAGKAG MLDEIINYVQ SLQRQVEFLS MKLAAVNPRL EFNIENLFAK EVFPSCTINF 360 PAVGMSSEMA NPPYIHFNPV QQVVSSCGVE MGMGINSPDA ALRRTISAPV SIPDASFLDS 420 SCFTQIQPSP TWNFELQNLY NLAFDQGRST PFPSQPFTGS IEASDPKMEM

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MNRALPEMLQ CSDVTALERQ RARLKWQQEQ LQQQQEQQQL PEMLQCSDVT ALGARLKWHQ  60
EQLQQQQEQQ QSYFSELSGV FSSQTTHVQG FQGGLMSFDS VLGDMVMAPQ VKPDPGLETA  120
WPEFGKVDMA GMGFGPCGYG NGSSFDMNYA ISRTSRCQPA VAAAVAAEAV EVKGKESVVS  180
EKMGSAVGRE SFEKRKADKL QNSKVVADDD SKRIKACAEE GESKITGPNT NKSSSNNSNK  240
KKETSTDTSK ENSKVSEAQK PDYIHVRARR GQATDTHSLA ERVRREKISE RMKYLQDLVP  300
GCNKIAGKAG MLDEIINYVQ SLQRQVEFLS MKLAAVNPRL EFNIENLFAK EVFPSCTINF  360
PAVGMSSEMA NPPYIHFNPV QQVVSSCGVE MGMGINSPDA ALRRTISAPV SIPDASFLDS  420
SCFTQIQPSP TWNFELQNLY NLAFDQGRST PFPSQPFTGS IEASDPKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	1e-59	bHLH family protein