PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762359.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 247aa MW: 27749 Da PI: 9.1468

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.6	6.8e-19	9	54	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v++ G+++W++I+r ++ gR++k+c++rw + XP_022762359.1 9 KGPWSPEEDESLRKLVQRVGPRNWSLISRSIP-GRSGKSCRLRWCNQ 54 79****************************.*********985 PP
2	Myb_DNA-binding	57.2	3.9e-18	63	105	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd ++++a++++G++ W+tIar ++ gRt++ +k++w++ XP_022762359.1 63 AFTPEEDGIIIEAHAKYGNK-WATIARLLN-GRTDNAVKNHWNST 105 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MDQDFDRVKG PWSPEEDESL RKLVQRVGPR NWSLISRSIP GRSGKSCRLR WCNQLSPEVE 60 HRAFTPEEDG IIIEAHAKYG NKWATIARLL NGRTDNAVKN HWNSTLKRKR SMENGDTLQE 120 SEKRSAKSPR STISNNPGSP SGSDVSDLGL SFAESTQHSG VSTKLTLGRS WNESSELNND 180 NFSKEKEPLA EKHESGTKMA MLGPDLLAAM KEMIRKEVRD YMSEFGFQSE GVRNAGVKRI 240 GINMNIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-71	MYB family protein