PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762369.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 213aa    MW: 23095.3 Da    PI: 6.7344
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.31.3e-292104198
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l++ +     p++q++++ +v+++FG++ ++++l+++p+++r+++++sl++eA  r+ +Pv+Gavg++++ +++++q+
  XP_022762369.1   2 SCNGCRVLRKGCSENCILRQSLqcidnPQAQAHATVFVARFFGRAGLMSFLSSVPQTQRPALFQSLLFEAVGRMVNPVSGAVGLLWTRNWNVCQS 96 
                     6**********************99********************************************************************** PP

          DUF260  91 kaelallk 98 
                     +++++l++
  XP_022762369.1  97 AVQTVLQG 104
                     *9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSCNGCRVLR KGCSENCILR QSLQCIDNPQ AQAHATVFVA RFFGRAGLMS FLSSVPQTQR  60
PALFQSLLFE AVGRMVNPVS GAVGLLWTRN WNVCQSAVQT VLQGGTLHPL PEFSGGVSGS  120
DFEDVSETVG GGQFFGTKEH DFVKMKDFDE VIKCKATDID LCLMIGDDRT VKRMREATPS  180
SEESETTTLG SRSPGDGSSS KGGGEQKLMR LFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.13e-63LBD family protein