PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762462.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 219aa    MW: 25806.3 Da    PI: 7.594
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF854.5e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++ rqvtfskRr+g+lKK +ELSvLCda++ +iifsstgk+  y+s
  XP_022762462.1  9 KRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCS 59
                    79***********************************************96 PP
2K-box60.85.6e-2171158187
           K-box   1 yqkssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                     yqk +g++  e+ + e+l++ela L+ke++ Lq + R++ Ged++s+ l+eL qLeq+Le+s++k+R++K+++l e+ +++ +  +e+
  XP_022762462.1  71 YQKVTGTRiPEHDNREHLYNELAVLRKETRRLQLSMRRYTGEDMSSIPLEELDQLEQELERSVNKVRDRKERILEEENSNMYRWIQEH 158
                     678888888888999**************************************************************99997766655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MGRGKIPIKR IENQTTRQVT FSKRRAGLLK KTHELSVLCD AQIGLIIFSS TGKMCQYCSE  60
PYRMEQIIER YQKVTGTRIP EHDNREHLYN ELAVLRKETR RLQLSMRRYT GEDMSSIPLE  120
ELDQLEQELE RSVNKVRDRK ERILEEENSN MYRWIQEHRA AIEYQQGGLE AKPVEHQQVL  180
DQFPFYGEPS SVLQLATIPQ QFHSYQLQLA QPNLQDSNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.36e-85MIKC_MADS family protein