PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762473.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 429aa MW: 46919 Da PI: 5.5518

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.3	2e-05	2	34	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 e+ C+ + ++ +C++++ lC +C H+ XP_022762473.1 2 EPLCDFCRGVRAVVYCKSDSARLCLSCDGCVHS 34 689****99**************999885 PP
2	zf-B_box	16.8	1.4e-05	46	78	4	34
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedCllee..H 34 C++++++ + C d + lC+dC ++ XP_022762473.1 46 LLCEKCNSQSAVVRCLDEKLSLCQDCDWNGngC 78 57************************8776554 PP
3	CCT	62.7	1.1e-21	373	416	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_022762473.1 373 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 416 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MEPLCDFCRG VRAVVYCKSD SARLCLSCDG CVHSANLLSR RHARSLLCEK CNSQSAVVRC 60 LDEKLSLCQD CDWNGNGCSS LGHRREALNC YTGCPSLAEF RRIWSSVLDA SSPGCFDAAL 120 LVGALPANDD CFASCLNQRE QGVSFGLAGI KLNELDSCPK PKQCMEPSSL ISTNANYMPY 180 CRDQEPIFSE ELNIPKGHSD LKDFKVPDGD DLCEDLNIND VQLILETADK IFGCSQGQTR 240 YQFEGVGTDC ILMDKTLSVT ESDGPIENTL EASAAGQKDC VPFPSSQVGG SASVIAAMTG 300 TSNFMLINPG CNRNINLGYP VGQIPSTIAL SLPSNVTGEN SPADYQDCRL SPVFLTGDSP 360 WESNFEACCS QARDKAKMRY NEKKKTRTFG KQIRYASRKA RADTRKRVKG RFVKAGEAYD 420 YDPLVARNF

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MEPLCDFCRG VRAVVYCKSD SARLCLSCDG CVHSANLLSR RHARSLLCEK CNSQSAVVRC  60
LDEKLSLCQD CDWNGNGCSS LGHRREALNC YTGCPSLAEF RRIWSSVLDA SSPGCFDAAL  120
LVGALPANDD CFASCLNQRE QGVSFGLAGI KLNELDSCPK PKQCMEPSSL ISTNANYMPY  180
CRDQEPIFSE ELNIPKGHSD LKDFKVPDGD DLCEDLNIND VQLILETADK IFGCSQGQTR  240
YQFEGVGTDC ILMDKTLSVT ESDGPIENTL EASAAGQKDC VPFPSSQVGG SASVIAAMTG  300
TSNFMLINPG CNRNINLGYP VGQIPSTIAL SLPSNVTGEN SPADYQDCRL SPVFLTGDSP  360
WESNFEACCS QARDKAKMRY NEKKKTRTFG KQIRYASRKA RADTRKRVKG RFVKAGEAYD  420
YDPLVARNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	1e-107	CO-like family protein