PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022762527.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 454aa MW: 49676.6 Da PI: 9.0677

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022762527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	55	75	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H XP_022762527.1 55 CEICGKGFQRDQNLQLHRRGH 75 *******************88 PP
2	zf-C2H2	13.5	0.00021	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022762527.1 129 WKCEKCSKRYAVQSDWKAHSKTC 151 58*****************9998 PP
3	zf-C2H2	11.5	0.00091	159	177	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + XP_022762527.1 159 DCGTVFSRRDSFITHRAFC 177 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MTEESISNGF VPNSIPGSNP PVAKKKRNLP GTPDPEAEVI ALSPKTLMAT NRFLCEICGK 60 GFQRDQNLQL HRRGHNLPWK LKQRTTKEAR KRVYVCPEKT CVHHHPSRAL GDLTGIKKHF 120 CRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTREYKCDC GTVFSRRDSF ITHRAFCDAL 180 AEEAARVNAA SSMHSLAPSS ISYHLLGNPL GPGMAQHFSS IFKPISSNDE TVDQTRRGLS 240 LWMGQASQSH DSIAKSLQEI HQFGSVNSGS IYSDPLVSTS NPLACDYQLN WVFGNKVSSG 300 NAEELTSTSL PLNNVKENGP QLVSVPSLFS TQNHSHQTPS ANMSATALLQ KAAQIGATST 360 DTSFLGSFGT NCSNSQIQDG NKYSGLYGSN TPPTTLGSDL ENSANDISTL NQLQMYSAKR 420 RHTQNEDSTG GQTRDFLGVG VQAICRPSSI NGWI

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MTEESISNGF VPNSIPGSNP PVAKKKRNLP GTPDPEAEVI ALSPKTLMAT NRFLCEICGK  60
GFQRDQNLQL HRRGHNLPWK LKQRTTKEAR KRVYVCPEKT CVHHHPSRAL GDLTGIKKHF  120
CRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTREYKCDC GTVFSRRDSF ITHRAFCDAL  180
AEEAARVNAA SSMHSLAPSS ISYHLLGNPL GPGMAQHFSS IFKPISSNDE TVDQTRRGLS  240
LWMGQASQSH DSIAKSLQEI HQFGSVNSGS IYSDPLVSTS NPLACDYQLN WVFGNKVSSG  300
NAEELTSTSL PLNNVKENGP QLVSVPSLFS TQNHSHQTPS ANMSATALLQ KAAQIGATST  360
DTSFLGSFGT NCSNSQIQDG NKYSGLYGSN TPPTTLGSDL ENSANDISTL NQLQMYSAKR  420
RHTQNEDSTG GQTRDFLGVG VQAICRPSSI NGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-150	C2H2 family protein