PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762554.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 236aa    MW: 26798.9 Da    PI: 10.4859
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.51.5e-221663249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +i  k n qvtfskRr+g++KKA+EL++LC+++va+iifs+  k++ +
  XP_022762554.1 16 KIAKKNNLQVTFSKRRAGLFKKASELCTLCGVDVAIIIFSPAKKVFSF 63
                    578899**************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MTKNPNIGRQ KITMAKIAKK NNLQVTFSKR RAGLFKKASE LCTLCGVDVA IIIFSPAKKV  60
FSFGHPRVES IIDRFLSSRN LLFRNSTTSR LVEAHRNANI HELNIQLTQL LEHLEIEKRR  120
GEAVDKIRKA SQKNQCWWQA PINELGLDEL EQLRIALEEL KKNVAKQANK ALVESANNQW  180
QFLAVNGIGR HVNPFENKFN ETNLHCSVTD HQAYGFDSYK IKKASKGTLV CGPHTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-56M-type_MADS family protein