PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762555.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 244aa    MW: 26813.8 Da    PI: 5.2707
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.14.7e-233174245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + e++s rqvtfskRrng++KKA+EL+vLC+a++ +i+fs++gk
  XP_022762555.1 31 KLEDESSRQVTFSKRRNGLFKKASELCVLCGANIGIIVFSPKGK 74
                    6799***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MATLKQTNNK ENKSSSTTKA TRGRQKIQIK KLEDESSRQV TFSKRRNGLF KKASELCVLC  60
GANIGIIVFS PKGKPFCFGH PNVETIVDRY LSGNPAMHDQ EDGSATTGAT PSFEEFNEEC  120
REALEKLQEE KKRTKEIEEE KEEKKNKGEF WWDEPIDDMG LEELEAYVKA MEELRNNVAK  180
RANELMGDVF ASATVANADG LGHRFADQNG GFGSGGGYGD FGLGGDGFNF GHGPGLHFGG  240
GGQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-40M-type_MADS family protein