PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022763318.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 350aa MW: 40350.1 Da PI: 9.4658

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022763318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.2	1.1e-16	5	95	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ff +l+ s++l + l++p +f++++ + s+ l+ ++g +W+v + +k ++++++++GW+eFv+ +++g ++F+++g+s+f v++f XP_022763318.1 5 FFHKLILSSTLMDKKLRIPDNFVKKFRDE--LSVAAALTVPDGHVWRVGI--KKADNKIWFQEGWQEFVERYYIRVGYLLIFRYEGNSGF--SVSIF 95 788899999999999******999755..999************..********************************9999..88887 PP
2	B3	61	2.1e-19	248	338	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae+h +g++ ++l+ ++g++W v++ k+gr +++GW eF +n++ egD++vF+l +++ef l+v+vf XP_022763318.1 248 VLRPSYLYRGCIMYLPSCFAEKHlSGVSG---FIKLQLPDGKQWPVRC--LYKGGRAKFSQGWYEFTLENNIGEGDVCVFELLRSREFVLKVTVF 337 78899****************866743...5***********..666666779*******************999*******9 PP - CS B3 98 r 98 r XP_022763318.1 338 R 338 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MPRPFFHKLI LSSTLMDKKL RIPDNFVKKF RDELSVAAAL TVPDGHVWRV GIKKADNKIW 60 FQEGWQEFVE RYYIRVGYLL IFRYEGNSGF SVSIFNLYNS EINYQTNALV GTQYNHGKLY 120 PFEELEDDEC ISPALQNLFG APKLNNCINW SGEVNLHTSK GVNNQPIRVK LHSSGAELPK 180 PKKPGRKKRK FDPNEQDSSA GHEDDGEMRF RFYESASARK RTVTAEERER AINAAKAFEP 240 TNPFCRVVLR PSYLYRGCIM YLPSCFAEKH LSGVSGFIKL QLPDGKQWPV RCLYKGGRAK 300 FSQGWYEFTL ENNIGEGDVC VFELLRSREF VLKVTVFRVM ESTGLMHRSQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MPRPFFHKLI LSSTLMDKKL RIPDNFVKKF RDELSVAAAL TVPDGHVWRV GIKKADNKIW  60
FQEGWQEFVE RYYIRVGYLL IFRYEGNSGF SVSIFNLYNS EINYQTNALV GTQYNHGKLY  120
PFEELEDDEC ISPALQNLFG APKLNNCINW SGEVNLHTSK GVNNQPIRVK LHSSGAELPK  180
PKKPGRKKRK FDPNEQDSSA GHEDDGEMRF RFYESASARK RTVTAEERER AINAAKAFEP  240
TNPFCRVVLR PSYLYRGCIM YLPSCFAEKH LSGVSGFIKL QLPDGKQWPV RCLYKGGRAK  300
FSQGWYEFTL ENNIGEGDVC VFELLRSREF VLKVTVFRVM ESTGLMHRSQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	190	PKKPGRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-158	B3 family protein