PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022763628.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 355aa    MW: 39341.4 Da    PI: 4.8236
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022763628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.31.4e-15191227135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_022763628.1 191 CQHCGISEklTPAMRRGPAGPRTLCNACGLMWANKGT 227
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MDTVNQRRLL ARPCGYEDDD AGFERKHING AHEVVMNGVM SSVNHGNGVG GGGFVQATRT  60
SELTIAFEGE VYVFPAVTSE KVQAVLLLLG GHDASINVPS SEFLLQEKVK AVGDSSRGSK  120
LSRRIASLVR FREKRKERCF EKKIRYTCRK EVAQRMHRKN GQFASLKECY NSADGSWDQS  180
DNTPESALGS CQHCGISEKL TPAMRRGPAG PRTLCNACGL MWANKGTLRD LRKGGRNAHF  240
DSNELETPAD IKPSTMEPEN SFANEDEQGS PEETKPVPWD HENHLIRSNE QEFAENSHPF  300
PVQVENSSVN LDDEDMQETL EELADASGSD FEIPSHFDEQ VDIDDNNVGT AWPEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.14e-48GATA family protein