PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022763637.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 895aa MW: 96221.1 Da PI: 8.9842

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022763637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	48.8	9.4e-16	805	841	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ XP_022763637.1 805 CTHCGISSkkTPMMRRGPAGPRTLCNACGLKWANKGV 841 ***88888**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS 60 GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID 120 VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG 180 TKIRVLTDKL PACAGPTEEI VEIEGGVLAV KKALVAVSHR LQDCPPVNKT KVTENRTIES 240 VLPETLHRPI ELLPEETLHR PIDLLPKETL HRPIDLLPQE TLRRPIDLLP RETLRRPIEV 300 VPQDPLCRPI DVVPQEFFHR HIEVVSQEAL SDLHVDHLSQ RSSLVPSIPG SSISYATRAH 360 PLSLESEKAP PLDTKTMQQE VVFKILCPSG RVGGVIGKGG AIIKALQSDT GATITIGATI 420 TDCDERLITV TASENPESRY SPAQKAVVLV FVRAFEASIE KGLDSGSGKV SNVTTRVVVP 480 SSQVGCLLGK GGAIISEMRK ATGTIMRILG TDQVPKCVTE NDQVVQISGG YLNVRDAIYH 540 VTGRLRENLF STTLKSAGAK SSSLVLTETS PYERLLDATP FGLQVLSGVS HSLSRHTTLA 600 LNRMDPLGLS HSSDRPRSPG LWTSEMATGL NPRNIVDIGR GLTSFRGGFE LCSGNKSAIV 660 TNTTVEIRVP ENVIDSVYGE NGRNLARLRE VQEVLLLLGG YEIPSGIPAL GTVSVTQRGM 720 GDFPGRSIQP QRAASLNRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKAISDE 780 VASASSGWSG AAGSGQDESM QEILCTHCGI SSKKTPMMRR GPAGPRTLCN ACGLKWANKG 840 VLRDLSKVST AANQDPTAKT TEQNDAEASE SEGVTLTTDV VSLSNGDNSA VTAER

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS  60
GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID  120
VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG  180
TKIRVLTDKL PACAGPTEEI VEIEGGVLAV KKALVAVSHR LQDCPPVNKT KVTENRTIES  240
VLPETLHRPI ELLPEETLHR PIDLLPKETL HRPIDLLPQE TLRRPIDLLP RETLRRPIEV  300
VPQDPLCRPI DVVPQEFFHR HIEVVSQEAL SDLHVDHLSQ RSSLVPSIPG SSISYATRAH  360
PLSLESEKAP PLDTKTMQQE VVFKILCPSG RVGGVIGKGG AIIKALQSDT GATITIGATI  420
TDCDERLITV TASENPESRY SPAQKAVVLV FVRAFEASIE KGLDSGSGKV SNVTTRVVVP  480
SSQVGCLLGK GGAIISEMRK ATGTIMRILG TDQVPKCVTE NDQVVQISGG YLNVRDAIYH  540
VTGRLRENLF STTLKSAGAK SSSLVLTETS PYERLLDATP FGLQVLSGVS HSLSRHTTLA  600
LNRMDPLGLS HSSDRPRSPG LWTSEMATGL NPRNIVDIGR GLTSFRGGFE LCSGNKSAIV  660
TNTTVEIRVP ENVIDSVYGE NGRNLARLRE VQEVLLLLGG YEIPSGIPAL GTVSVTQRGM  720
GDFPGRSIQP QRAASLNRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKAISDE  780
VASASSGWSG AAGSGQDESM QEILCTHCGI SSKKTPMMRR GPAGPRTLCN ACGLKWANKG  840
VLRDLSKVST AANQDPTAKT TEQNDAEASE SEGVTLTTDV VSLSNGDNSA VTAER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	5e-51	GATA family protein