PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022763643.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 771aa MW: 81977.5 Da PI: 9.3724

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022763643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.5	5.9e-16	681	717	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ XP_022763643.1 681 CTHCGISSkkTPMMRRGPAGPRTLCNACGLKWANKGV 717 ***88888**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS 60 GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID 120 VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG 180 TKIRVLTDKL PACAGPTEEI VEEALSDLHV DHLSQRSSLV PSIPGSSISY ATRAHPLSLE 240 SEKAPPLDTK TMQQEVVFKI LCPSGRVGGV IGKGGAIIKA LQSDTGATIT IGATITDCDE 300 RLITVTASEN PESRYSPAQK AVVLVFVRAF EASIEKGLDS GSGKVSNVTT RVVVPSSQVG 360 CLLGKGGAII SEMRKATGTI MRILGTDQVP KCVTENDQVV QISGGYLNVR DAIYHVTGRL 420 RENLFSTTLK SAGAKSSSLV LTETSPYERL LDATPFGLQV LSGVSHSLSR HTTLALNRMD 480 PLGLSHSSDR PRSPGLWTSE QMATGLNPRN IVDIGRGLTS FRGGFELCSG NKSAIVTNTT 540 VEIRVPENVI DSVYGENGRN LARLREVQEV LLLLGGYEIP SGIPALGTVS VTQRGMGDFP 600 GRSIQPQRAA SLNRFREKRK ERCFDKKIRY TVRKEVALRM QRKKGQFTSS KAISDEVASA 660 SSGWSGAAGS GQDESMQEIL CTHCGISSKK TPMMRRGPAG PRTLCNACGL KWANKGVLRD 720 LSKVSTAANQ DPTAKTTEQN DAEASESEGV TLTTDVVSLS NGDNSAVTAE R

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS  60
GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID  120
VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG  180
TKIRVLTDKL PACAGPTEEI VEEALSDLHV DHLSQRSSLV PSIPGSSISY ATRAHPLSLE  240
SEKAPPLDTK TMQQEVVFKI LCPSGRVGGV IGKGGAIIKA LQSDTGATIT IGATITDCDE  300
RLITVTASEN PESRYSPAQK AVVLVFVRAF EASIEKGLDS GSGKVSNVTT RVVVPSSQVG  360
CLLGKGGAII SEMRKATGTI MRILGTDQVP KCVTENDQVV QISGGYLNVR DAIYHVTGRL  420
RENLFSTTLK SAGAKSSSLV LTETSPYERL LDATPFGLQV LSGVSHSLSR HTTLALNRMD  480
PLGLSHSSDR PRSPGLWTSE QMATGLNPRN IVDIGRGLTS FRGGFELCSG NKSAIVTNTT  540
VEIRVPENVI DSVYGENGRN LARLREVQEV LLLLGGYEIP SGIPALGTVS VTQRGMGDFP  600
GRSIQPQRAA SLNRFREKRK ERCFDKKIRY TVRKEVALRM QRKKGQFTSS KAISDEVASA  660
SSGWSGAAGS GQDESMQEIL CTHCGISSKK TPMMRRGPAG PRTLCNACGL KWANKGVLRD  720
LSKVSTAANQ DPTAKTTEQN DAEASESEGV TLTTDVVSLS NGDNSAVTAE R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	1e-51	GATA family protein