PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764146.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 359aa MW: 38957.6 Da PI: 5.2083

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89.8	2.9e-28	50	144	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ +e++s +++ ++l+ XP_022764146.1 50 RWTRQEILVLIQGKRVAENRVRRGRaaglafgsvQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWENNIGEETESFWVMRNDLR 144 8********************98888889999********************************************999999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MALEQLNLAA TPGPVDGLID PVNASTNGVE FRPASVDGGD DVSKAPRLPR WTRQEILVLI 60 QGKRVAENRV RRGRAAGLAF GSVQVEPKWA SVSSYCKRHG VNRGPVQCRK RWSNLAGDFK 120 KIKEWENNIG EETESFWVMR NDLRRERKLP GFFDKEVYDI LDGGATTVPA SATAPGLALA 180 LAPTPPAQDV VEDAEAVFDS GRSAAAEDGL FSDFEQDDAA GSPEKIEPSV AAAAGKAVPA 240 PIPISEKQYQ PQPALGGIGN QSQGTTNEKR PTSNPEVGSA SQEARKRKRT AIDGDEEMSS 300 LQYHLIDVLE RNGKMLVAQL EAQNTNFQQD REQRKDHTDN LVAVLNKLAD ALGRIADKL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MALEQLNLAA TPGPVDGLID PVNASTNGVE FRPASVDGGD DVSKAPRLPR WTRQEILVLI  60
QGKRVAENRV RRGRAAGLAF GSVQVEPKWA SVSSYCKRHG VNRGPVQCRK RWSNLAGDFK  120
KIKEWENNIG EETESFWVMR NDLRRERKLP GFFDKEVYDI LDGGATTVPA SATAPGLALA  180
LAPTPPAQDV VEDAEAVFDS GRSAAAEDGL FSDFEQDDAA GSPEKIEPSV AAAAGKAVPA  240
PIPISEKQYQ PQPALGGIGN QSQGTTNEKR PTSNPEVGSA SQEARKRKRT AIDGDEEMSS  300
LQYHLIDVLE RNGKMLVAQL EAQNTNFQQD REQRKDHTDN LVAVLNKLAD ALGRIADKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-119	Trihelix family protein