PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764430.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 331aa MW: 37767.9 Da PI: 6.0956

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	79.5	3.5e-25	127	187	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqKe+ +s+ prsY+rCt + gC+++k+v+r ++d ++ +i Y g+H+++ XP_022764430.1 127 GDGHAWRKYGQKEILNSKQPRSYFRCTRKydqGCRATKQVQRMEDDSQMYQISYIGTHTCR 187 59***********************998899***********************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGTPWPERLS SNKKRVIQEL VHGQECATQL QILFHKPSEE GGRLSAEELV HKILRSFDET 60 LSVLSACDSA EVSHSQATSN GDPPCCDDRR SEDSSESRKR PVSKDRRGCY KRKRAAQTWT 120 VVSATIGDGH AWRKYGQKEI LNSKQPRSYF RCTRKYDQGC RATKQVQRME DDSQMYQISY 180 IGTHTCRDSF RLPQIISDSE SWEFYMGSKI SRKPQHHHLN PSTTATIKQE SKEETTPHHL 240 NPSTTPIIKQ ESKEETTPSD LTDLDSVMWK DIMGGGFEYS SEPAGMGSDY GDVVSNVYSC 300 TEITSQNFEL DFLIKPAEFE NDFHFDEIEF V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	114	RKRPVSKDRRGCYKRKR
2	111	138	KRKRAAQTWTVVSATIGDGHAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	8e-48	WRKY family protein