PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022764468.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 168aa    MW: 18798.6 Da    PI: 8.0382
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022764468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.99.2e-40111101100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+l+r+C+++C++apyf ++++kkfa vhk+FGasnv+k+l ++pee+red++ sl+yeAear+rdPvyG++g i  lq+++ +l+++la
  XP_022764468.1  11 SCAACKLLKRRCSPNCIFAPYFRSDERKKFAKVHKVFGASNVSKILIEVPEEQREDTVYSLAYEAEARLRDPVYGCIGAIALLQRKMIELQHDLA 105
                     6********************************************************************************************** PP

          DUF260  96 llkee 100
                     l++++
  XP_022764468.1 106 LARAR 110
                     99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MRSLEPRSTS SCAACKLLKR RCSPNCIFAP YFRSDERKKF AKVHKVFGAS NVSKILIEVP  60
EEQREDTVYS LAYEAEARLR DPVYGCIGAI ALLQRKMIEL QHDLALARAR LARYAATSSA  120
INTDCISMGP FADFPAVCGG FIDSFSQNIS SEVIQDAHMY DFSQIPYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.17e-62LBD family protein