PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022764515.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 227aa    MW: 25471.9 Da    PI: 4.7228
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022764515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260121.74.1e-387106199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf+ ++ +++fa+vhk+FGasnv+kll +lp   r+da+ ++ yeA ar+rdP+yG+v++i++lqqq+++l++e+
  XP_022764515.1   7 SCGACKFLRRKCTSECVFAPYFCYDEaASHFAAVHKVFGASNVSKLLLQLPIVYRSDAAVTISYEALARIRDPIYGCVAHIFALQQQVANLQEEI 101
                     6***********************9868******************************************************************9 PP

          DUF260  95 allke 99 
                     + l +
  XP_022764515.1 102 KILIN 106
                     97655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MTGLGSSCGA CKFLRRKCTS ECVFAPYFCY DEAASHFAAV HKVFGASNVS KLLLQLPIVY  60
RSDAAVTISY EALARIRDPI YGCVAHIFAL QQQVANLQEE IKILINQMTN HAVEFPGCLN  120
PHAATYSDGK IQFDSLHETI STLYYQDEQA TLHNHPGFIT GNQILNGELC QSIPPSYKWE  180
EDLNFLCDFY QNIPEMYFQG VESGILIDYP CMGNSTVITN WEGSIWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.14e-55LBD family protein