PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765114.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 811aa    MW: 89001.6 Da    PI: 6.5109
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.51.8e-21118173156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++k +++t++q++eLe++F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k
  XP_022765114.1 118 KKKYHRHTPHQIQELESFFKECPHPDEKQRMELSRRLGLENKQIKFWFQNRRTQMK 173
                     79999************************************************999 PP
2START175.82.7e-553195402204
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     +a++a++el+k+a+ ++p+W+k      e +n +e+ ++f++  +     +++ea r++g+v+  +  lve+l+d + +W e+++    +a++++
  XP_022765114.1 319 VALAAMDELIKMAQMGDPLWFKGLdggmETLNFEEYSRTFSSCIGmkpsgYTTEATRETGLVFLHSLALVETLMDAN-RWAEMFPcmisRAAIID 412
                     6899********************999999999999999988777********************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vissg      ++lq+m ae+q+lsplvp R + f+R+++q+++g+w++vdvS+d  q+  + + +  +++lpSg++i++++n +skvtwveh +
  XP_022765114.1 413 VISSGkgvtrdNTLQVMDAEFQVLSPLVPvRQVRFIRFCKQQSEGVWAVVDVSIDASQDAANIQMFPNCRRLPSGCVIQDMDNKYSKVTWVEHSE 507
                     ************************************************************9999999**************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqc 204
                     ++++ +h+llr+l++sg  +ga +wvatlqrq 
  XP_022765114.1 508 YDDSAVHYLLRPLLSSGFGFGAHRWVATLQRQS 540
                     ******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 811 aa     Download sequence    
MSFRGLIKSS SSSESGCVGA RIVVADIVPH RNMLSGAIVE PPLLTQHIPK SMQSSPSLSL  60
YYKRMDGHGE MGLIRENFDP GLVGMMKEDG YESRSGSDNF EGASGDDQDA SADGPPKKKK  120
YHRHTPHQIQ ELESFFKECP HPDEKQRMEL SRRLGLENKQ IKFWFQNRRT QMKTQLERHE  180
NLILRQENDK LLAENDFLKQ AMTSPICNSC GGPAVPGEVS YEQHQLRIEN ARLKDELSRV  240
CALTNKFLGR PFSSSASPIP SQGLNSNLEL AVGRNGFGGL NNAGTTLPMG FDFGDGAMVP  300
LMKPMANEMP YDRSAFAGVA LAAMDELIKM AQMGDPLWFK GLDGGMETLN FEEYSRTFSS  360
CIGMKPSGYT TEATRETGLV FLHSLALVET LMDANRWAEM FPCMISRAAI IDVISSGKGV  420
TRDNTLQVMD AEFQVLSPLV PVRQVRFIRF CKQQSEGVWA VVDVSIDASQ DAANIQMFPN  480
CRRLPSGCVI QDMDNKYSKV TWVEHSEYDD SAVHYLLRPL LSSGFGFGAH RWVATLQRQS  540
DCLAVLMSPN IPGEDNTGIT PAGRKSMIKL AQRMTNNFCS GVCASSMHKW DKLSVGNVGE  600
DVRVMTRKNI NDPGEPRGVV LSASTSVWML INQKSLFDFL RDEQMRSQWD ILSNGGPMQE  660
MVKVAKGRGH GNYVSLLRGS AINANENNML ILQETWSDVS GALVVYAPID ISSMSVVMNG  720
GDSTYVALLP SGFAILPCIS PNNHVGQSNS NGPLVKPDID GSISGGCLLT VGFQILVNSA  780
PTAKLTMESV ETVNNLISCT IQKIKAALAV T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein