PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765129.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 747aa    MW: 82103.5 Da    PI: 5.929
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.61.6e-2154109156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++k +++t++q++eLe++F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k
  XP_022765129.1  54 KKKYHRHTPHQIQELESFFKECPHPDEKQRMELSRRLGLENKQIKFWFQNRRTQMK 109
                     79999************************************************999 PP
2START1762.3e-552554762204
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     +a++a++el+k+a+ ++p+W+k      e +n +e+ ++f++  +     +++ea r++g+v+  +  lve+l+d + +W e+++    +a++++
  XP_022765129.1 255 VALAAMDELIKMAQMGDPLWFKGLdggmETLNFEEYSRTFSSCIGmkpsgYTTEATRETGLVFLHSLALVETLMDAN-RWAEMFPcmisRAAIID 348
                     6899********************999999999999999988777********************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vissg      ++lq+m ae+q+lsplvp R + f+R+++q+++g+w++vdvS+d  q+  + + +  +++lpSg++i++++n +skvtwveh +
  XP_022765129.1 349 VISSGkgvtrdNTLQVMDAEFQVLSPLVPvRQVRFIRFCKQQSEGVWAVVDVSIDASQDAANIQMFPNCRRLPSGCVIQDMDNKYSKVTWVEHSE 443
                     ************************************************************9999999**************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqc 204
                     ++++ +h+llr+l++sg  +ga +wvatlqrq 
  XP_022765129.1 444 YDDSAVHYLLRPLLSSGFGFGAHRWVATLQRQS 476
                     ******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MDGHGEMGLI RENFDPGLVG MMKEDGYESR SGSDNFEGAS GDDQDASADG PPKKKKYHRH  60
TPHQIQELES FFKECPHPDE KQRMELSRRL GLENKQIKFW FQNRRTQMKT QLERHENLIL  120
RQENDKLLAE NDFLKQAMTS PICNSCGGPA VPGEVSYEQH QLRIENARLK DELSRVCALT  180
NKFLGRPFSS SASPIPSQGL NSNLELAVGR NGFGGLNNAG TTLPMGFDFG DGAMVPLMKP  240
MANEMPYDRS AFAGVALAAM DELIKMAQMG DPLWFKGLDG GMETLNFEEY SRTFSSCIGM  300
KPSGYTTEAT RETGLVFLHS LALVETLMDA NRWAEMFPCM ISRAAIIDVI SSGKGVTRDN  360
TLQVMDAEFQ VLSPLVPVRQ VRFIRFCKQQ SEGVWAVVDV SIDASQDAAN IQMFPNCRRL  420
PSGCVIQDMD NKYSKVTWVE HSEYDDSAVH YLLRPLLSSG FGFGAHRWVA TLQRQSDCLA  480
VLMSPNIPGE DNTGITPAGR KSMIKLAQRM TNNFCSGVCA SSMHKWDKLS VGNVGEDVRV  540
MTRKNINDPG EPRGVVLSAS TSVWMLINQK SLFDFLRDEQ MRSQWDILSN GGPMQEMVKV  600
AKGRGHGNYV SLLRGSAINA NENNMLILQE TWSDVSGALV VYAPIDISSM SVVMNGGDST  660
YVALLPSGFA ILPCISPNNH VGQSNSNGPL VKPDIDGSIS GGCLLTVGFQ ILVNSAPTAK  720
LTMESVETVN NLISCTIQKI KAALAVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein