PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765133.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 739aa    MW: 83562.5 Da    PI: 6.0783
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS393.52.3e-1203657351373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+ v+++d + a++lL+++++++s+ gd mqR+a+yf+ +L+arla+s++++y al +++ts    +++l+a++l+  ++P+ k+s+
  XP_022765133.1 365 LRTLLTLCAQSVATDDRRSANQLLKQIRQHSSSMGDGMQRMAHYFVDGLEARLAGSGTKIYTALITKPTS---AADVLKAYHLYLAACPFRKLSN 456
                     5789*************************************************************99999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                        N++I++  e++ r+HiiDf+i +G+QWp+L++ L+sRp+gpp+lRiTg++ p++g   +e++eetg+rLa++Ae+++vpfef++ +a+++++
  XP_022765133.1 457 CFSNRTIMNLSENAARLHIIDFGILYGFQWPCLIRHLSSRPGGPPKLRITGIDLPQPGfrPAERVEETGRRLANYAETFKVPFEFHA-IAQKWDT 550
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E+l+Vn++++l +llde+v +es+rd+vL+l++++ P+v+++   +  ++s+ F +rf eal +ys+lfd+le+++pre  er+
  XP_022765133.1 551 IQIEDLKIDSDEVLVVNCMYRLRNLLDETVVVESPRDKVLNLIRKMHPDVFILGIVNGACSSPFFITRFREALFHYSTLFDMLETNVPREIPERM 645
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +Ere++g+e++nv+acegaer+er et+++W+ r ++aG++++pl+++++k ak  + +++ + + ++e++ +l++gWk+r ++++S+W
  XP_022765133.1 646 LIEREIFGWEAMNVIACEGAERIERPETYKQWQVRNMRAGLRQLPLNKEITKMAKERVDTFYHKDFVIDEDNRWLLQGWKGRIVYALSSW 735
                     **************************************************************889************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    
MDGSLKGPYS SVDRFRLNDD TMLALSGRNF DNRFKNENFV DIPLLQPAPI PRSIASSSSV  60
NEEGDLHEDY DFSDVVLKFI SQMLMEEDME DKTCMFKESS AALQAAEKSF YEVLGERYPP  120
SSNYELKPYA DQKQEGSDDS HDQSCWRCSS ASISSSSSSS NLVNPGCNHF LGEQRSLNFA  180
SQSNSSHRLG NSTGSVVVGF VDSPVSTLRL PEIFNDSESV IGVMQFRKGF EEASRFLPNG  240
GSLFVDVESD GLFLKELKEE AKEVVDKVEK NEFLQDGSRG KKNPHPEDVN LETERSNKQS  300
FFYTESTVSA EMFDAVLLNG QSVTDLQKVL QNETSKNVEQ NGKLKGSTGG KARGKKQGKR  360
NVVDLRTLLT LCAQSVATDD RRSANQLLKQ IRQHSSSMGD GMQRMAHYFV DGLEARLAGS  420
GTKIYTALIT KPTSAADVLK AYHLYLAACP FRKLSNCFSN RTIMNLSENA ARLHIIDFGI  480
LYGFQWPCLI RHLSSRPGGP PKLRITGIDL PQPGFRPAER VEETGRRLAN YAETFKVPFE  540
FHAIAQKWDT IQIEDLKIDS DEVLVVNCMY RLRNLLDETV VVESPRDKVL NLIRKMHPDV  600
FILGIVNGAC SSPFFITRFR EALFHYSTLF DMLETNVPRE IPERMLIERE IFGWEAMNVI  660
ACEGAERIER PETYKQWQVR NMRAGLRQLP LNKEITKMAK ERVDTFYHKD FVIDEDNRWL  720
LQGWKGRIVY ALSSWVPAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein