PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765134.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 702aa MW: 77571.2 Da PI: 9.5305

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	4.9e-07	586	635	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ I + +Rt ++k++w ++ XP_022765134.1 586 RRPFSVSEVEALVQAVEELGTGRWRDIKLRAFenaDHRTYVDLKDKWKTL 635 678999*******************988888999*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MVFKKRSDYG FNAFNVPRAP RSIRRRGRAK RTVEDSQICA FELLASLAGK LLQESESSAS 60 SNASEGHDHV TIGKDVVKQE IHYQDKPLKT ESVEQGSFEV SVVASESTTE NSDNLKGFTH 120 AGDDAILERT SIKKQRAFSE QISGDLKAVI CKGNVAYGNF PGNVDRCSPN FGELCDGKSE 180 NEFKKERDSK GLETGALSIG NTCPLKDPVS MTFPAPINSN RDVKLTSHRD PLLNASFSRH 240 RNDIKLGSRD DDDKNFSRFN KLTNRFKASR PPTCIGDRRI RKLLTSKYWK VAPKLKDFEH 300 SRADGGIKPL YRKRKTYYNY DRCQYDTYKR RKFFDRSSIV TYDGGISSES VSNSPEKVMN 360 GDKSSSAAML NGACGISSLH TSHHASNKSN DSHVKFSIKS FRIPELYIEV PETATVGSLK 420 RTVMEAVTAL LGGGIRVGVL LQGKKVRDDS RTLSQTGISS EDNLDALGFT LEPGPAKAPP 480 PVYSEEPPLL LSCDAAAQNL TSSSATPVVD TGIPDDTPGS SLLTNSANHM DNNHELVSSP 540 TDMLTDKSLP DSRALVPVPA MNVESLAVVP FNQKIRKSEL AQRRTRRPFS VSEVEALVQA 600 VEELGTGRWR DIKLRAFENA DHRTYVDLKD KWKTLVHTAK ISPQQRRGEP VPQELLDRVL 660 AAHAYWSQHQ AKQQGKHHPG TLRITDAQAD RNGVAAIPTV TM

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MVFKKRSDYG FNAFNVPRAP RSIRRRGRAK RTVEDSQICA FELLASLAGK LLQESESSAS  60
SNASEGHDHV TIGKDVVKQE IHYQDKPLKT ESVEQGSFEV SVVASESTTE NSDNLKGFTH  120
AGDDAILERT SIKKQRAFSE QISGDLKAVI CKGNVAYGNF PGNVDRCSPN FGELCDGKSE  180
NEFKKERDSK GLETGALSIG NTCPLKDPVS MTFPAPINSN RDVKLTSHRD PLLNASFSRH  240
RNDIKLGSRD DDDKNFSRFN KLTNRFKASR PPTCIGDRRI RKLLTSKYWK VAPKLKDFEH  300
SRADGGIKPL YRKRKTYYNY DRCQYDTYKR RKFFDRSSIV TYDGGISSES VSNSPEKVMN  360
GDKSSSAAML NGACGISSLH TSHHASNKSN DSHVKFSIKS FRIPELYIEV PETATVGSLK  420
RTVMEAVTAL LGGGIRVGVL LQGKKVRDDS RTLSQTGISS EDNLDALGFT LEPGPAKAPP  480
PVYSEEPPLL LSCDAAAQNL TSSSATPVVD TGIPDDTPGS SLLTNSANHM DNNHELVSSP  540
TDMLTDKSLP DSRALVPVPA MNVESLAVVP FNQKIRKSEL AQRRTRRPFS VSEVEALVQA  600
VEELGTGRWR DIKLRAFENA DHRTYVDLKD KWKTLVHTAK ISPQQRRGEP VPQELLDRVL  660
AAHAYWSQHQ AKQQGKHHPG TLRITDAQAD RNGVAAIPTV TM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	283	DRRIRKL
2	312	332	RKRKTYYNYDRCQYDTYKRRK
3	313	333	RKRKTYYNYDRCQYDTYKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	3e-94	MYB_related family protein