PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765135.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 471aa MW: 51750.2 Da PI: 9.465

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	355	404	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ I + +Rt ++k++w ++ XP_022765135.1 355 RRPFSVSEVEALVQAVEELGTGRWRDIKLRAFenaDHRTYVDLKDKWKTL 404 678999*******************988888999*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MVFKKRSDYG FNAFNVPRAP RSIRRRGRAK RTVEDSQICA FELLASLAGK LLQESESSAS 60 SNASEGHDHV TIDGGIKPLY RKRKTYYNYD RCQYDTYKRR KFFDRSSIVT YDGGISSESV 120 SNSPEKVMNG DKSSSAAMLN GACGISSLHT SHHASNKSND SHVKFSIKSF RIPELYIEVP 180 ETATVGSLKR TVMEAVTALL GGGIRVGVLL QGKKVRDDSR TLSQTGISSE DNLDALGFTL 240 EPGPAKAPPP VYSEEPPLLL SCDAAAQNLT SSSATPVVDT GIPDDTPGSS LLTNSANHMD 300 NNHELVSSPT DMLTDKSLPD SRALVPVPAM NVESLAVVPF NQKIRKSELA QRRTRRPFSV 360 SEVEALVQAV EELGTGRWRD IKLRAFENAD HRTYVDLKDK WKTLVHTAKI SPQQRRGEPV 420 PQELLDRVLA AHAYWSQHQA KQQGKHHPGT LRITDAQADR NGVAAIPTVT M

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MVFKKRSDYG FNAFNVPRAP RSIRRRGRAK RTVEDSQICA FELLASLAGK LLQESESSAS  60
SNASEGHDHV TIDGGIKPLY RKRKTYYNYD RCQYDTYKRR KFFDRSSIVT YDGGISSESV  120
SNSPEKVMNG DKSSSAAMLN GACGISSLHT SHHASNKSND SHVKFSIKSF RIPELYIEVP  180
ETATVGSLKR TVMEAVTALL GGGIRVGVLL QGKKVRDDSR TLSQTGISSE DNLDALGFTL  240
EPGPAKAPPP VYSEEPPLLL SCDAAAQNLT SSSATPVVDT GIPDDTPGSS LLTNSANHMD  300
NNHELVSSPT DMLTDKSLPD SRALVPVPAM NVESLAVVPF NQKIRKSELA QRRTRRPFSV  360
SEVEALVQAV EELGTGRWRD IKLRAFENAD HRTYVDLKDK WKTLVHTAKI SPQQRRGEPV  420
PQELLDRVLA AHAYWSQHQA KQQGKHHPGT LRITDAQADR NGVAAIPTVT M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	101	RKRKTYYNYDRCQYDTYKRRK
2	82	102	RKRKTYYNYDRCQYDTYKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	2e-82	MYB_related family protein