PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765148.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 656aa MW: 72514.7 Da PI: 7.1714

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.9	1.3e-21	118	173	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++k +++t++q++eLe++F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k XP_022765148.1 118 KKKYHRHTPHQIQELESFFKECPHPDEKQRMELSRRLGLENKQIKFWFQNRRTQMK 173 79999************************************************999 PP
2	START	137.6	1.3e-43	220	385	48	204
EEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE CS START 48 lrasgvvdmvlallveellddkeqWdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvd 131 + + +++ + a +++ l ++ +W e+++ +a++++vissg ++lq+m ae+q+lsplvp R + f+R+++q+++g+w++vdvS+d XP_022765148.1 220 SYEQHQLRIENA-RLKDELSRN-RWAEMFPcmisRAAIIDVISSGkgvtrdNTLQVMDAEFQVLSPLVPvRQVRFIRFCKQQSEGVWAVVDVSID 312 555556666666.677777888.9********************************************************************* PP -TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS START 132 seqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqc 204 q+ + + + +++lpSg++i++++n +skvtwveh +++++ +h+llr+l++sg +ga +wvatlqrq XP_022765148.1 313 ASQDAANIQMFPNCRRLPSGCVIQDMDNKYSKVTWVEHSEYDDSAVHYLLRPLLSSGFGFGAHRWVATLQRQS 385 *9999999********************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MSFRGLIKSS SSSESGCVGA RIVVADIVPH RNMLSGAIVE PPLLTQHIPK SMQSSPSLSL 60 YYKRMDGHGE MGLIRENFDP GLVGMMKEDG YESRSGSDNF EGASGDDQDA SADGPPKKKK 120 YHRHTPHQIQ ELESFFKECP HPDEKQRMEL SRRLGLENKQ IKFWFQNRRT QMKTQLERHE 180 NLILRQENDK LLAENDFLKQ AMTSPICNSC GGPAVPGEVS YEQHQLRIEN ARLKDELSRN 240 RWAEMFPCMI SRAAIIDVIS SGKGVTRDNT LQVMDAEFQV LSPLVPVRQV RFIRFCKQQS 300 EGVWAVVDVS IDASQDAANI QMFPNCRRLP SGCVIQDMDN KYSKVTWVEH SEYDDSAVHY 360 LLRPLLSSGF GFGAHRWVAT LQRQSDCLAV LMSPNIPGED NTGITPAGRK SMIKLAQRMT 420 NNFCSGVCAS SMHKWDKLSV GNVGEDVRVM TRKNINDPGE PRGVVLSAST SVWMLINQKS 480 LFDFLRDEQM RSQWDILSNG GPMQEMVKVA KGRGHGNYVS LLRGSAINAN ENNMLILQET 540 WSDVSGALVV YAPIDISSMS VVMNGGDSTY VALLPSGFAI LPCISPNNHV GQSNSNGPLV 600 KPDIDGSISG GCLLTVGFQI LVNSAPTAKL TMESVETVNN LISCTIQKIK AALAVT

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MSFRGLIKSS SSSESGCVGA RIVVADIVPH RNMLSGAIVE PPLLTQHIPK SMQSSPSLSL  60
YYKRMDGHGE MGLIRENFDP GLVGMMKEDG YESRSGSDNF EGASGDDQDA SADGPPKKKK  120
YHRHTPHQIQ ELESFFKECP HPDEKQRMEL SRRLGLENKQ IKFWFQNRRT QMKTQLERHE  180
NLILRQENDK LLAENDFLKQ AMTSPICNSC GGPAVPGEVS YEQHQLRIEN ARLKDELSRN  240
RWAEMFPCMI SRAAIIDVIS SGKGVTRDNT LQVMDAEFQV LSPLVPVRQV RFIRFCKQQS  300
EGVWAVVDVS IDASQDAANI QMFPNCRRLP SGCVIQDMDN KYSKVTWVEH SEYDDSAVHY  360
LLRPLLSSGF GFGAHRWVAT LQRQSDCLAV LMSPNIPGED NTGITPAGRK SMIKLAQRMT  420
NNFCSGVCAS SMHKWDKLSV GNVGEDVRVM TRKNINDPGE PRGVVLSAST SVWMLINQKS  480
LFDFLRDEQM RSQWDILSNG GPMQEMVKVA KGRGHGNYVS LLRGSAINAN ENNMLILQET  540
WSDVSGALVV YAPIDISSMS VVMNGGDSTY VALLPSGFAI LPCISPNNHV GQSNSNGPLV  600
KPDIDGSISG GCLLTVGFQI LVNSAPTAKL TMESVETVNN LISCTIQKIK AALAVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00730.1	0.0	HD-ZIP family protein