PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765349.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1630aa MW: 178829 Da PI: 5.6204

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.4e-07	783	824	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + + +c+++++k XP_022765349.1 783 PWTSEEKEIFMDKLAAFGKD-FRKIASFLD-QKMTADCVEFYYK 824 8***************99.*****.9********98 PP
2	Myb_DNA-binding	37.7	4.9e-12	1002	1042	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av +G++ +++I++++g +R+++qck ++ XP_022765349.1 1002 DWTDEEKSVFIQAVSSYGKD-FAKISQYVG-TRSRNQCKVFFS 1042 5***************99.*****.******8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1630 aa Download sequence
MPPEPLPWDR KDFYKERRHE RTESQPQQPL TARWRNSLSM SSYQHGSFRE FARWGSADFR 60 RPPGHGKQGS WHLFAEENGG QGYVPSWSGD KILDDENFSQ SVFRGDGKYS RNSSRENNRG 120 SCSQRDWRGH SWEISNGSLS APERPPDVNN EKKLVDDMLT YPSRTNSDFV NASDLLQKDL 180 HDNKKGGVNG LGTGQRCERE ISIGSMDWKP LKWSRSGSLS SRGSGFSHSS SSKSFGGVDS 240 GEGKPELQQK ILTPVQSPSG NAAACVTSAV PPDEIKSRKK RRLGWGEGLA KYEKKKVEGP 300 DTSMNRDAAT ISVGNMEPNN SLSSNLADKS PILGFFDCAS PATPSSVACS SSPGVEEKSF 360 GKAADIDNDI SNLCGSPSLG SQNHLEVDSS FVHSTAISKL LLWKGDVLKA LEMTESEIDS 420 LENELKLLKG DSGSRCPCPA ISSSLPVEEN GKACEEQEAV SSMIPQPALL KIDTCGDALE 480 KLPVCNGLLV EVNADVKDGD FDSPGTVSSK FGEPLTLEKA VSPSDFVKFD ECSGNLGAVQ 540 LTTMEVILST GSSNDGTVAP ISGEGSVLKE IDNDAHVPES SNSDSGGENL IYDIILAANK 600 ELANGASKVF DNLLPKDQCS IEISEIANVA CWQTDSSIRE KIAMRKRYLR FKERVLTLKF 660 KAFHHMWKED MRLLSMRKYR AKSQKKYELS LRPAHVGYQK HRSSISSRVA SPAGNLILEP 720 SSEIINFGSK LRLDSQVRLY RHALKMPALF LDEKEKKVSR FISSNGLVED PCAIEKERAL 780 INPWTSEEKE IFMDKLAAFG KDFRKIASFL DQKMTADCVE FYYKNHKSEC FEKTKKKLDL 840 SKQGKSSANT YLLTSGKKWS RELNAASLDV LGAASIITAH AESGVRNRQM SSGRIFLGGR 900 FYSKTCRVDD SIAERSRSFD IIGNDRETVA ADVLAGICGS LSSEAMSSCI TSSADPGESY 960 HREWKCHRVD SVVKRPSTSG VTQNVDDDSC SDESCGEMDP TDWTDEEKSV FIQAVSSYGK 1020 DFAKISQYVG TRSRNQCKVF FSKARKCLGL DLIHPRTRNM GTPTSDDANG GESDMEDGCV 1080 LDISVVYSDK LGSKVEDLPS IPSTIVNMNL DEPNPIGEMS LQTNLNISEE NNGRLVDHKD 1140 SEAVEAMASD VGQTEPISEG GGDDMDVDSN KAESVQDQKS VVLANLNAVR NAEQGLSVAV 1200 SASVEEAVDR CLPSLDAVVE CKSDAVWSTE GFGNDLEAQE TSLSKNGLDE RDTKCSAGTS 1260 CQIISRLDSN KIISESVNKN SCSDFTFNTK GPHQAPLDLD SAEMPSVVLL PNGNTSAKNS 1320 ALHGSDAFQC ERICNQDRLS STLDYQENED KQAYKSFSGD ESDCLSGKPL VDLAESYHIL 1380 RGYQMNGDVS CSQLPEVKSL STSKRGVTGP YLAQDCYLQK CNGSKSAAEL PLLVPNLKQA 1440 NGCPKSHSRS LSDTEKPCRN GNVKLFGQIL NTSSQGDEKV AYFPKQSSKS SSLKFTGHNN 1500 VDGKTSFSKF DRNNYHALEN VPQMSYGFWD GNRIQTGLSS LPSSAILVAK YPAALVNYPA 1560 PHHKMEQQAL QIYVRSSERD WNGVSVFPSR EISSNRSMVD YKVYRDRDWI KVAPFTLDVN 1620 DLRDAMTKWV

Sequence ? help Back to Top

Protein Sequence Length: 1630 aa Download sequence

MPPEPLPWDR KDFYKERRHE RTESQPQQPL TARWRNSLSM SSYQHGSFRE FARWGSADFR  60
RPPGHGKQGS WHLFAEENGG QGYVPSWSGD KILDDENFSQ SVFRGDGKYS RNSSRENNRG  120
SCSQRDWRGH SWEISNGSLS APERPPDVNN EKKLVDDMLT YPSRTNSDFV NASDLLQKDL  180
HDNKKGGVNG LGTGQRCERE ISIGSMDWKP LKWSRSGSLS SRGSGFSHSS SSKSFGGVDS  240
GEGKPELQQK ILTPVQSPSG NAAACVTSAV PPDEIKSRKK RRLGWGEGLA KYEKKKVEGP  300
DTSMNRDAAT ISVGNMEPNN SLSSNLADKS PILGFFDCAS PATPSSVACS SSPGVEEKSF  360
GKAADIDNDI SNLCGSPSLG SQNHLEVDSS FVHSTAISKL LLWKGDVLKA LEMTESEIDS  420
LENELKLLKG DSGSRCPCPA ISSSLPVEEN GKACEEQEAV SSMIPQPALL KIDTCGDALE  480
KLPVCNGLLV EVNADVKDGD FDSPGTVSSK FGEPLTLEKA VSPSDFVKFD ECSGNLGAVQ  540
LTTMEVILST GSSNDGTVAP ISGEGSVLKE IDNDAHVPES SNSDSGGENL IYDIILAANK  600
ELANGASKVF DNLLPKDQCS IEISEIANVA CWQTDSSIRE KIAMRKRYLR FKERVLTLKF  660
KAFHHMWKED MRLLSMRKYR AKSQKKYELS LRPAHVGYQK HRSSISSRVA SPAGNLILEP  720
SSEIINFGSK LRLDSQVRLY RHALKMPALF LDEKEKKVSR FISSNGLVED PCAIEKERAL  780
INPWTSEEKE IFMDKLAAFG KDFRKIASFL DQKMTADCVE FYYKNHKSEC FEKTKKKLDL  840
SKQGKSSANT YLLTSGKKWS RELNAASLDV LGAASIITAH AESGVRNRQM SSGRIFLGGR  900
FYSKTCRVDD SIAERSRSFD IIGNDRETVA ADVLAGICGS LSSEAMSSCI TSSADPGESY  960
HREWKCHRVD SVVKRPSTSG VTQNVDDDSC SDESCGEMDP TDWTDEEKSV FIQAVSSYGK  1020
DFAKISQYVG TRSRNQCKVF FSKARKCLGL DLIHPRTRNM GTPTSDDANG GESDMEDGCV  1080
LDISVVYSDK LGSKVEDLPS IPSTIVNMNL DEPNPIGEMS LQTNLNISEE NNGRLVDHKD  1140
SEAVEAMASD VGQTEPISEG GGDDMDVDSN KAESVQDQKS VVLANLNAVR NAEQGLSVAV  1200
SASVEEAVDR CLPSLDAVVE CKSDAVWSTE GFGNDLEAQE TSLSKNGLDE RDTKCSAGTS  1260
CQIISRLDSN KIISESVNKN SCSDFTFNTK GPHQAPLDLD SAEMPSVVLL PNGNTSAKNS  1320
ALHGSDAFQC ERICNQDRLS STLDYQENED KQAYKSFSGD ESDCLSGKPL VDLAESYHIL  1380
RGYQMNGDVS CSQLPEVKSL STSKRGVTGP YLAQDCYLQK CNGSKSAAEL PLLVPNLKQA  1440
NGCPKSHSRS LSDTEKPCRN GNVKLFGQIL NTSSQGDEKV AYFPKQSSKS SSLKFTGHNN  1500
VDGKTSFSKF DRNNYHALEN VPQMSYGFWD GNRIQTGLSS LPSSAILVAK YPAALVNYPA  1560
PHHKMEQQAL QIYVRSSERD WNGVSVFPSR EISSNRSMVD YKVYRDRDWI KVAPFTLDVN  1620
DLRDAMTKWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein