PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765676.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 556aa MW: 60504.7 Da PI: 5.0094

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.6e-17	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+++vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_022765676.1 40 KGPWTSAEDAILIEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 87 79******************************************9986 PP
2	Myb_DNA-binding	53.9	4.1e-17	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_022765676.1 93 KGAFTQEEEQLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 136 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MSHTKNEREE GMLSKDQTEL PLIGDGSCGG GAGGGVALKK GPWTSAEDAI LIEYVKKHGE 60 GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA 120 HLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVCLQALQV SHSTSAVNGR DKGPHDTLQN 180 NSYEIPDVIF DSLKANQNVL PYVPKLPDIS AGSMLMKGLG SSQYCSIMPP AIHRQKRLRE 240 SMAFFPGYTA TVKNECPLFE QLQDDMSDKA ARSFGLSFLI EPDPATNNSQ SFGAFPGSHA 300 LSNGNFSASE PSFEAVKLEL PSLQYPETEL GNWGTLSCPP PLLESVDAFI QSPPPTSGVQ 360 SDCLSPRNSG LLDALIHEAK TLSTAKNHAS DKSSNSSTPD DIAESSIFNI CETEWENCGE 420 PLSPMGHSAT SLFSECISAS GSSLDEQPPA ETFTESHVKS ESADRALTPE VQKEAPIQLD 480 NSRPDTLLAS NWLEQDSGYN KDQTIMTDAI ATLLGDDLSS EYKNMAAGTS ISSQAWGLGS 540 CVWNNMPAVC QMSELP

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MSHTKNEREE GMLSKDQTEL PLIGDGSCGG GAGGGVALKK GPWTSAEDAI LIEYVKKHGE  60
GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA  120
HLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVCLQALQV SHSTSAVNGR DKGPHDTLQN  180
NSYEIPDVIF DSLKANQNVL PYVPKLPDIS AGSMLMKGLG SSQYCSIMPP AIHRQKRLRE  240
SMAFFPGYTA TVKNECPLFE QLQDDMSDKA ARSFGLSFLI EPDPATNNSQ SFGAFPGSHA  300
LSNGNFSASE PSFEAVKLEL PSLQYPETEL GNWGTLSCPP PLLESVDAFI QSPPPTSGVQ  360
SDCLSPRNSG LLDALIHEAK TLSTAKNHAS DKSSNSSTPD DIAESSIFNI CETEWENCGE  420
PLSPMGHSAT SLFSECISAS GSSLDEQPPA ETFTESHVKS ESADRALTPE VQKEAPIQLD  480
NSRPDTLLAS NWLEQDSGYN KDQTIMTDAI ATLLGDDLSS EYKNMAAGTS ISSQAWGLGS  540
CVWNNMPAVC QMSELP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-146	MYB family protein