PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765677.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 646aa MW: 74027.1 Da PI: 7.1409

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.8	5.2e-08	462	502	2	39
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 ++WT+eE ell ++ +++++g +W+ I++++g+ R+ ++ XP_022765677.1 462 KPWTKEEIELLRKGMQKYPKGtsrRWEVISEYIGTERSVEE 502 69********************************8888776 PP
2	Myb_DNA-binding	28.1	4.9e-09	589	633	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ XP_022765677.1 589 VWSAVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKKFA 633 6******************************.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MAVHTSIQLI SYSQELVDGQ PLYVSSNCLP VKAIKYEPAG HAFHYAALKL LGCEDDDTAE 60 VDDRNVTNDK EQVYMPSSDS YSSKGKKKSA SDGKQQDHYA LLGLSHLRYL ATEDQIRRSY 120 REAALRHHPD KLAALILAEE TEAAKQAKKD EIENHFKSIQ EAYEILIDPI KRRIYDSADE 180 FDDEIPTECA LQDFFKVFGP AFMRNGRWSV NQPIPSLGDD STPLKDVDNF YNFWYSFKSW 240 REFPHADEYD LEQAESRDHK RWMERQNAKL SEKARKEEYA RIRALVDNAY KRDPRILRRK 300 EEEKAEKQRK KEAKFRAKQL QEEEAARAAE EERRQKEEEE KRAAEAALQH KKMKEKEKKL 360 LRKERTRLRT LSAPALSQHL LDLSEDDVES LCMTLGIDQL RSLCDKMKNK EGLEQAQLIR 420 DAQGYNGDVE EKKQDEMNSS QLNGSVESNG SVLLSSFEKK EKPWTKEEIE LLRKGMQKYP 480 KGTSRRWEVI SEYIGTERSV EEILKATKTV LLQKPDASKA FDSFLEKRKP AQSITSPLST 540 REEVVVSAYS GTESSSAKTV SQEDSGKSAS NPIDVVSTNG PSSSSEQDVW SAVQERALVQ 600 ALKTFPKETS QRWERVAAAV PGKTVNQCKK KFALLKENFR NKKNTV

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MAVHTSIQLI SYSQELVDGQ PLYVSSNCLP VKAIKYEPAG HAFHYAALKL LGCEDDDTAE  60
VDDRNVTNDK EQVYMPSSDS YSSKGKKKSA SDGKQQDHYA LLGLSHLRYL ATEDQIRRSY  120
REAALRHHPD KLAALILAEE TEAAKQAKKD EIENHFKSIQ EAYEILIDPI KRRIYDSADE  180
FDDEIPTECA LQDFFKVFGP AFMRNGRWSV NQPIPSLGDD STPLKDVDNF YNFWYSFKSW  240
REFPHADEYD LEQAESRDHK RWMERQNAKL SEKARKEEYA RIRALVDNAY KRDPRILRRK  300
EEEKAEKQRK KEAKFRAKQL QEEEAARAAE EERRQKEEEE KRAAEAALQH KKMKEKEKKL  360
LRKERTRLRT LSAPALSQHL LDLSEDDVES LCMTLGIDQL RSLCDKMKNK EGLEQAQLIR  420
DAQGYNGDVE EKKQDEMNSS QLNGSVESNG SVLLSSFEKK EKPWTKEEIE LLRKGMQKYP  480
KGTSRRWEVI SEYIGTERSV EEILKATKTV LLQKPDASKA FDSFLEKRKP AQSITSPLST  540
REEVVVSAYS GTESSSAKTV SQEDSGKSAS NPIDVVSTNG PSSSSEQDVW SAVQERALVQ  600
ALKTFPKETS QRWERVAAAV PGKTVNQCKK KFALLKENFR NKKNTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06110.1	0.0	MYB family protein