PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765701.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 293aa MW: 32146.5 Da PI: 4.9699

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	53.3	6e-17	7	83	22	98
NF-YC 22 PlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 arikki++adedv +i+ +Pvl+ska elf+ +l ++ + + +t++ ++ +v++ ++fdfl div r XP_022765701.1 7 KWARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDHTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDIVSR 83 569***********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MKETKGKWAR IKKIMQADED VGKIALAVPV LVSKALELFL QDLCDHTYEI TLQRGAKTMN 60 SLHLKHCVQS YNVFDFLRDI VSRVPDYSHG HSDAAADDRT ISRRRKAAGD EANDSDEESK 120 RSRMHDVGHA GSSGRGRGRG RGRGRGRGAR NVERDVHREI ELEPCSTLQQ SNKSHSTPGM 180 VIDDGSDLKE PMKESTVAED TNQAVVNFDL NAEVDENVDT KASAGAGTVV APATIAAVAA 240 AQSSSAEPTT ETKHEEYPGW SLSDMDKMAI DPLQLAQLGR RLDEDEEDYD EEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	144	RGRGRGRGRG
2	135	145	RGRGRGRGRGR
3	137	146	RGRGRGRGRG
4	137	147	RGRGRGRGRGR
5	139	148	RGRGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	4e-69	NF-YC family protein