PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765850.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 537aa    MW: 61571.7 Da    PI: 4.714
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS135.46e-421685363374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL +  ea +++++ la+ +L+ +se  sp g++ +R+a+     L++ ++++++ l     ++e+    s++  +a+ +f++++P+ +f+h++
  XP_022765850.1 168 HLLKAYGEATEKNQKDLAEVILKCVSEKGSPVGETWERIAFN----LSQEIQNQSDYL-----MQES----SKNFETAFWAFYQMFPYGRFAHFA 249
                     77888889999999**************************97....566666622222.....2233....4566678889************** PP

            GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     aN+aIlea+ ++ +++Hi+Dfd+++G+QWp++++a+a +     +lR+T +   e++      + e t+++L + A+++g+ ++ + +    +e+
  XP_022765850.1 250 ANSAILEAMPNDaDMLHIVDFDLGEGIQWPPMIEAMAWQ---HKTLRLTSIRWGEEDfacCPWRFEDTRRQLCDHARSFGLMIKVEEM---GIEE 338
                     *********9998999*********************96...457******99888889999**********************9997...5555 PP

            GRAS 189 l..eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvksl..........sPkvvvvveqeadhnsesFl...erflealeyysa 266
                     l  el++++ +   +E la n+++ l ++   +++++++ +e+L++ k+l          +  ++++ + +a   +++F    + f   l +y a
  XP_022765850.1 339 LkkELKKMKKRGgaREWLAFNCMVGLPHMG--KAKSRKHVNEFLNAAKELlqssdnyiirNRGIITFGDGDACEKQKDFSgygTFFDWQLMHYQA 431
                     511245554444889**************8..677777799*******98665554445445699******888888776221456679****** PP

            GRAS 267 lfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgs 357
                     +++s+++++p++  ++r+ +E  ++g++i++    ++ +  e +e   + ++  +   ++ +++s++  ++ak ++r  + + y+v    +  ++
  XP_022765850.1 432 VLESMQSNFPKQLvQARMAMECLFVGPNICSQAWFQKWK--EINE-SCHFQAGTR---LEGLKVSTQRLMEAKEIVRGRE-NAYEVCiggNCGNE 519
                     **********9999***************8877776666..3333.223333333...45678999************99.55999866667999 PP

            GRAS 358 lvlgWkdrpLvsvSaWr 374
                     l+l W++  Lv vS+Wr
  XP_022765850.1 520 LTLEWRGIMLVRVSSWR 536
                     ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MMQSENFPPS WPFHSFANST IDQFEPYSLN MGVPFDVCEF SSSFTTRKDS SEISSISHFS  60
TMFSSEIFPY PACDDQLQVT VPSEDFSVPF EGLESMLTDG IEDLYNCLDE SEESFPLSQP  120
LSSQRQYVWS PSPSIRSSEA STDMTSMRSS LNMPGEAMEI DNQLSIFHLL KAYGEATEKN  180
QKDLAEVILK CVSEKGSPVG ETWERIAFNL SQEIQNQSDY LMQESSKNFE TAFWAFYQMF  240
PYGRFAHFAA NSAILEAMPN DADMLHIVDF DLGEGIQWPP MIEAMAWQHK TLRLTSIRWG  300
EEDFACCPWR FEDTRRQLCD HARSFGLMIK VEEMGIEELK KELKKMKKRG GAREWLAFNC  360
MVGLPHMGKA KSRKHVNEFL NAAKELLQSS DNYIIRNRGI ITFGDGDACE KQKDFSGYGT  420
FFDWQLMHYQ AVLESMQSNF PKQLVQARMA MECLFVGPNI CSQAWFQKWK EINESCHFQA  480
GTRLEGLKVS TQRLMEAKEI VRGRENAYEV CIGGNCGNEL TLEWRGIMLV RVSSWRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.14e-16GRAS family protein