PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765924.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 365aa MW: 40450.3 Da PI: 6.5611

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.7	7.5e-20	38	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+++kq+G g+W++ +r g++R++k+c++rw +yl XP_022765924.1 38 KGPWTPEEDQKLVHYIKQHGHGSWRALPRLAGLNRCGKSCRLRWTNYL 85 79********************************************97 PP
2	Myb_DNA-binding	53.3	6.5e-17	91	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_022765924.1 91 RGKFSQDEEQTILHLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 136 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MSFGGDKGKP SDQSKGIERA EINNMGRSPC CDENGLKKGP WTPEEDQKLV HYIKQHGHGS 60 WRALPRLAGL NRCGKSCRLR WTNYLRPDIK RGKFSQDEEQ TILHLHSILG NKWSAIATHL 120 PGRTDNEIKN FWNTHLKKKL IQMGIDPMTH QPRTDIFASL PQLIALANLR DLMEGTHPLD 180 EHDVRLQAEA AQLAKLQCLQ YLVQSAASIT NNSYNQNGIA DMEAFNLVNS SVPHIKENPV 240 LNSAPFSLVN ATSQPLHHPT LLSHLPADPD PQVPFSFQTS LNGENASLNS EVGYCSNFKM 300 VSQGDNQTDN SSSWLLPSPT LPPTATETSL SNPGGDASST SSYNGTASPY WPELYFEDSM 360 MHEIS

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MSFGGDKGKP SDQSKGIERA EINNMGRSPC CDENGLKKGP WTPEEDQKLV HYIKQHGHGS  60
WRALPRLAGL NRCGKSCRLR WTNYLRPDIK RGKFSQDEEQ TILHLHSILG NKWSAIATHL  120
PGRTDNEIKN FWNTHLKKKL IQMGIDPMTH QPRTDIFASL PQLIALANLR DLMEGTHPLD  180
EHDVRLQAEA AQLAKLQCLQ YLVQSAASIT NNSYNQNGIA DMEAFNLVNS SVPHIKENPV  240
LNSAPFSLVN ATSQPLHHPT LLSHLPADPD PQVPFSFQTS LNGENASLNS EVGYCSNFKM  300
VSQGDNQTDN SSSWLLPSPT LPPTATETSL SNPGGDASST SSYNGTASPY WPELYFEDSM  360
MHEIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-112	MYB family protein