PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766112.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 220aa MW: 25803 Da PI: 9.1111

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61	1.8e-19	60	113	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++ql+ Le+ F+++ +++ +++ +L+++lgL+ rq+ vWFqNrRa++k XP_022766112.1 60 KKKRLTSDQLDSLERSFQEDIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWK 113 56779************************************************9 PP
2	HD-ZIP_I/II	119.2	2.2e-38	59	150	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q+ +LE+sF+e+ kL+p+rK++l+reLglqprq+avWFqnrRAR+k+kqlE+ y+aLk++yd +++e+++L++ev +L+ l+ XP_022766112.1 59 EKKKRLTSDQLDSLERSFQEDIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEYDVISREKQKLQDEVMKLKGMLR 150 69*************************************************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MDWNGALRTF VSRREPSLNF LYNYNYDQYP GMEMKHPGLA EAAHGLIPGL DKNSYNNQEK 60 KKRLTSDQLD SLERSFQEDI KLDPDRKMKL SRELGLQPRQ IAVWFQNRRA RWKAKQLERL 120 YDALKQEYDV ISREKQKLQD EVMKLKGMLR EQATRNQVST GYTEISGEET VESTSIRSSN 180 KQRVVANHHH PIAECNYLFN VDEYNPVSSP YWGAQLPSYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	89	KKKRLTSDQLDSLERSFQEDIKLDPDRKMK
2	108	116	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	1e-59	HD-ZIP family protein