PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766137.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 342aa MW: 38007.1 Da PI: 7.1634

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_022766137.1 14 KGSWSPEEDAKLKEYIEKHGSGaNWIALPQKAGLRRCGKSCRLRWLNYL 62 799********************************************97 PP
2	Myb_DNA-binding	36.3	1.3e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022766137.1 69 GDFSDDEDRIICTLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRAPCCDKA NVKKGSWSPE EDAKLKEYIE KHGSGANWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGD FSDDEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLFGM 120 VPQSQRKPHN LHHASSSSLF QSSSPSSLSP SPLFSSPSSR LFYNCSNNTY HTPTRSFSGF 180 EVSYSSSFSN SSASCITAAP VLQPLQESLL GPMQHYQLQD GLQMFGGEAT CSSSDGSSGN 240 QMSQSKELEY EFADGRGSNG ANNVDQQIGM HSYFYNDRDE NQELMASNGD GVNGWSEKAS 300 SGLWGETPLN YGLEEIKQLI STSSCNSFIF YENKAEEKVM YY

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRAPCCDKA NVKKGSWSPE EDAKLKEYIE KHGSGANWIA LPQKAGLRRC GKSCRLRWLN  60
YLRPNIKHGD FSDDEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLFGM  120
VPQSQRKPHN LHHASSSSLF QSSSPSSLSP SPLFSSPSSR LFYNCSNNTY HTPTRSFSGF  180
EVSYSSSFSN SSASCITAAP VLQPLQESLL GPMQHYQLQD GLQMFGGEAT CSSSDGSSGN  240
QMSQSKELEY EFADGRGSNG ANNVDQQIGM HSYFYNDRDE NQELMASNGD GVNGWSEKAS  300
SGLWGETPLN YGLEEIKQLI STSSCNSFIF YENKAEEKVM YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	8e-75	MYB family protein