PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766218.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 377aa MW: 41654.7 Da PI: 4.8863

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.8e-18	47	92	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l+++v ++G ++W++Iar + gR++k+c++rw + XP_022766218.1 47 KGPWSPEEDAILIELVSKFGARNWSLIARGIV-GRSGKSCRLRWCNQ 92 79****************************.*********985 PP
2	Myb_DNA-binding	55.2	1.6e-17	99	143	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd+ ++ a++ +G++ W+ Iar ++ gRt++ +k++w++ XP_022766218.1 99 RKPFTDEEDQMIISAHAVHGNK-WAVIARLLP-GRTDNAIKNHWNST 143 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MEMEIEAFEN GNDTTVTEIN DPSTEEGGDE DRDDLAVRGR ARRERVKGPW SPEEDAILIE 60 LVSKFGARNW SLIARGIVGR SGKSCRLRWC NQLDPAVKRK PFTDEEDQMI ISAHAVHGNK 120 WAVIARLLPG RTDNAIKNHW NSTLRRWGMD LGGIKPESEN MVEDASLDKT KGSSEETLSC 180 AEGSSFRSLE GKDVSSLEKV DNQFKGKALT GIQSSHESIE PPTLFRPVAR IGAFNVYNNV 240 DAPEIVSPCS RTVPMLEGVY TERLVPLHCG LGCCGTQNGR NQNISLLGPE FVEFSEPPSF 300 PNYELAALAT DISNLAWLKS GLENNSIRDM DDAAGGTASH RSQVLMGHFE ESGTSDYLRI 360 EEKNKKLMGR MTNLLSI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MEMEIEAFEN GNDTTVTEIN DPSTEEGGDE DRDDLAVRGR ARRERVKGPW SPEEDAILIE  60
LVSKFGARNW SLIARGIVGR SGKSCRLRWC NQLDPAVKRK PFTDEEDQMI ISAHAVHGNK  120
WAVIARLLPG RTDNAIKNHW NSTLRRWGMD LGGIKPESEN MVEDASLDKT KGSSEETLSC  180
AEGSSFRSLE GKDVSSLEKV DNQFKGKALT GIQSSHESIE PPTLFRPVAR IGAFNVYNNV  240
DAPEIVSPCS RTVPMLEGVY TERLVPLHCG LGCCGTQNGR NQNISLLGPE FVEFSEPPSF  300
PNYELAALAT DISNLAWLKS GLENNSIRDM DDAAGGTASH RSQVLMGHFE ESGTSDYLRI  360
EEKNKKLMGR MTNLLSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-104	MYB family protein